Asparagus officinalis (garden asparagus): 109848431
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Entry
109848431 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109848431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109848431
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109848431
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
109848431
NCBI-ProteinID:
XP_020273501
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Position
7:complement(143923016..143925752)
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AA seq
612 aa
AA seq
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MTPAAASHPLRTKVSSITTTNENEGVSIIRSDEVTGKSSTDGTTTSVAGKSGSLSLDALA
KAKKALQMQKELSEKLKKIPTLNKLASTSNSQVASNREGKNVTPATTSMTSVQLTSSSAG
LPVGATTTGTGTLSGLANQPAIEAVKRAQELAAKMGYRQDPEFAPLINMFPGSSTVPEMA
APRPSKVPVLRLDAQGREIDEHGNVINMPKLTNLSTLKVNINKQKKEAFQILRPELDADI
QSNPHFDERMGLNKTKLLRPKRMSFQFVEEGKWAKQAEITKIKNQFGEAQSKELKVKQSQ
LAKAKAEPDDNPNLIAIGERVFKEKKKDEIPEIEWWDKPLLPSGSYTDDAEEKLNMEKIT
IYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPK
VKMSNLMKVLGSEATQDPTRLEMEIRSAAAEREQAHVDRNIAXERKLFEDPNTLETLVSV
YKINDLSHPQTRFKVDVNAQENRLSGCAVISDGISVVVVEGGKKSVKRYGKLMLKRINWA
AAVSNDDDGDENADSVVNSCSLVWQGSVAKPSFHRFLVHQCRSEAAARKIFADAGVPHYW
DLAINFSDDLDA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgcagctgctagtcatccccttcgtactaaggtatcttcaattactaccacc
aatgaaaatgagggagttagtattatcagatctgatgaggttactggaaaatctagtaca
gatgggactactacttcagttgctggcaaaagcggcagtctgtctcttgatgctttagcc
aaagctaagaaagctttacagatgcagaaggaattgtctgagaagctaaagaagattcct
acgctaaataagcttgctagtacaagcaactcgcaggtagcatctaatagagaagggaag
aatgttactccagcaacgacttccatgacctcagttcagttaacgtcaagctctgcaggt
ttacctgttggtgctactaccactggcacaggtaccctttctgggcttgcaaaccaacca
gcaattgaagcagtgaagcgtgctcaagagctcgcggcaaagatgggatatcgtcaggat
ccagagtttgcccctcttataaatatgtttcctggatcatcaacagtacctgagatggca
gcacctcgaccttccaaagttcctgtactgcgattagatgctcagggtagagaaatagat
gaacatgggaatgtcattaatatgcctaagttgacaaatctcagcacgttgaaggtaaac
atcaacaaacagaagaaggaagcatttcaaatattgcgaccagaacttgatgctgacata
caatcaaatcctcattttgatgagagaatgggtcttaacaaaaccaaactattaaggccg
aaaaggatgtcttttcaatttgtggaggaaggtaaatgggctaaacaggcagagatcacc
aaaattaagaatcaatttggtgaagcacaatccaaggagctgaaggtgaagcaatcacag
cttgctaaggcaaaggccgagcctgatgataacccaaatttaattgccattggtgagagg
gttttcaaagaaaaaaagaaggatgagatacccgaaattgagtggtgggacaaacctctc
ttaccttctggatcttacactgacgatgctgaagaaaaactgaacatggaaaagatcacg
atatacgtagagcatcctcgtcctattgagccaccagcagagccagccccgccaccacca
caacccctcaagcttacaaaaaaggagcagaagaaactgaggactcaacgccgccttgca
aaggaaaaggacaggcaggagatgattaggcaaggtctactagagcctcccaagcctaaa
gtcaaaatgagtaatctcatgaaagtccttggctccgaagcaactcaagatccaacaagg
ttggaaatggaaattcgcagtgctgctgctgagcgtgagcaagctcacgtcgatagaaac
attgctnncgaaaggaaactctttgaggatccaaacactttggaaaccctagtttctgtt
tacaaaattaatgacctctctcatcctcaaacacgcttcaaggtcgatgtgaatgctcaa
gagaatcgcctcagtggatgtgctgtgatatctgatggcatcagtgttgttgttgttgaa
ggtggtaagaaatctgttaagaggtatggaaagctgatgctgaagaggataaactgggca
gctgctgtgagcaatgatgatgatggagatgagaatgctgattctgtagtcaatagttgc
tctttggtttggcaagggagtgttgcgaagcctagctttcatagatttcttgttcatcag
tgtagaagtgaagctgctgctaggaaaatttttgcagatgctggagttccacactattgg
gatcttgcaattaatttttctgatgatcttgacgcttaa
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