Asparagus officinalis (garden asparagus): 109848439
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Entry
109848439 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109848439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109848439
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109848439
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
U-box type E3
109848439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
TPR_Trm732_C
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
Arm_2
KAP
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109848439
NCBI-ProteinID:
XP_020273517
LinkDB
All DBs
Position
7:5587486..5592814
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AA seq
656 aa
AA seq
DB search
MDEDESGSLVCKMIATVDEIAAISDYRNPYRKQLFNLARRIKLLVTMLEEIRDDGDPISD
QAAEILAPLRAALDSAKELLLFGSGGSKICLVLERDKIMKRFQEVTTQLEQALDGISFEK
LDISDEVREQVELVHAQFKRAKERVDAPDEELFGDLSTAYNVSDCNTVDPSILKRLAEKL
QLMTISDLKQESLALHELVVSSGGVDPGENIEKMSMLLKKIKDFVQTQNPEMGNPPNPNV
TPSDEKLKIPVIPDDFRCPISLELMKDPVIVSTGQTYERCCIEKWIEAGHTTCPKTQQKL
PNTSLTPNYVLRSLISQWCESNGVPPPERPLCSNKPPSTCSSAEHAKVVELICRLSSHNL
EDQRMAAGELRLLAKRSSENRVCIAKAGAIPLLVNLLSIPDSRTQEHAVTALLNLSICEE
NKGRIVSSGAVPGIVHVLKKGCMEARENAAATLFSLSVVDENKVTIGASGAIPALALLLS
EGSQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMTDEALAILAILSP
LXXXSHSEGKAAIAAAEAVPVLVEIIGSGSPRNRENAAAVLVHLCSGEQQHQRLTEAKEL
GVLGPLQDLAANGTERGKRKAAQLLERINRFLDQQAEAEAEAQADQLMMPASLFYR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgagagcggatctctggtgtgcaagatgattgcgacggtggacgagatc
gcggcgatctccgattacaggaacccgtacagaaaacagctgtttaatttggcgagaagg
atcaagctcttggttacgatgctggaggagatcagagacgacggggatccgatctcagat
caggcggcggagatcctcgctccgctgagggccgcgctggattcggcgaaggagttgctt
ctgtttgggagcggcgggagcaagatctgcttggttctggagagggataaaataatgaaa
aggttccaggaagttaccacacagttagaacaagcgctggatggaatttcttttgagaaa
cttgacatatccgatgaagttagggagcaggtagaacttgtgcatgctcagttcaagaga
gccaaagaacgagtggatgcacctgacgaggagctatttggtgacctttcaactgcctat
aatgtttctgactgtaatacagtggacccatccatcttaaagagattggcagagaagtta
cagctgatgacaatatctgatctcaaacaagaatcactagcattgcacgagttggttgtt
tccagtggtggtgtagatcctggagaaaacatcgaaaagatgtcaatgctgttaaagaaa
atcaaagattttgtacagactcagaaccctgaaatgggaaacccgccaaatcccaacgtc
actccttctgatgaaaagctcaaaatcccagtcattccagatgattttcgctgcccaata
tctctcgagctgatgaaagatccagtaatagtatccactggacagacttatgaacgctgt
tgcattgagaaatggatagaggctgggcacaccacgtgcccaaagacgcagcagaagctt
cccaatacatcattaaccccaaactatgtcctccgcagtctcatatcacagtggtgcgag
tccaatggagtacctccaccagagaggccattatgctctaataagcccccatcaacatgc
tcctcagctgaacatgctaaagtcgttgaacttatctgcagactatcttcccacaacctt
gaagaccaacggatggctgctggcgaactccgacttcttgccaagcgcagttctgagaac
cgagtctgcatcgcgaaggccggggctataccactccttgttaacctactctccattcct
gattctcgaactcaggaacatgcagtcactgcgcttcttaacctctcaatttgtgaagag
aacaagggacgcatagtctcctctggagctgttcctggaattgtccacgtccttaaaaaa
ggctgcatggaagcacgcgaaaatgctgctgccactctcttcagcctctcagtggtcgac
gagaacaaggtcaccattggggcatctggagccattccagcgctcgctttgcttttaagt
gaaggcagccagcgaggcaagaaggatgcagcaactgcactgtttaatctatgcatttat
cagggtaataaaggaaaggcagtgagagctggagtcgttccaacgctaatgagactttta
acagaaccaggaggtggaatgactgatgaagccctagcaatactagcaatactatcacca
ctnnnnnnnnnnagccactctgaggggaaagcagcaattgcggctgcagaggctgtgcct
gtgctcgttgagattataggaagtgggtctccaagaaaccgagaaaatgcagcagctgtt
ctcgttcatttatgcagcggagagcagcagcatcagcgattaaccgaggctaaagagctt
ggggtgctgggtccgttgcaggatcttgcagctaatggtacagaaagaggcaagaggaaa
gcggcacagttacttgagcgcataaataggttcttggaccagcaagctgaggctgaggct
gaagcccaagcagatcaattgatgatgccagcttctttattttacagatga
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