Asparagus officinalis (garden asparagus): 109848441
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Entry
109848441 CDS
T05243
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109848441
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109848441
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109848441
NCBI-ProteinID:
XP_020273520
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Position
7:complement(84998863..85007869)
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AA seq
665 aa
AA seq
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MRPLHKLRKAISNCCTSGQQGPMSPIGVRLYVQDKYVIIDNGLLQLTLSKPDGIVTGIQY
NGVDNVMEVLNKEDNRGYWDHVWSEPGGNIIFDKIIGTDFSIIAEDDNQVEVSFTRMWDP
SLKDTTIAPLNIEKSFRFVMLRGSSGFYTYGIYEHLEGWPDFDMPEARIAFKLRKDKFQY
MALADDRQRIMPMPDDRLPGRGKQLAYPEAVLLVNPINPELKGEVDDKYQYSIENKDNKV
HGWISFDPPIGFWQITPSDEFRTGGPIKQDLTSHVGPTTLAMFVSTHYAGADLALQFRGG
EYWKKVFGPVFMYLNSSWIFTDPQLLWEDAKIQMQIEVDSWPYNFPFSEDYPTSEQRGCV
TGRLLVSDRYIDDEYIYAGYAYVGLALPGETGSWQRESKGYQFWTRADAFGEFSISNVRI
GDYNLYAWVPGFVGDYRFDATIMLTAGCIIDLGDLIYEPPRDGPTLWEIGVPDRSAAEFF
VPDPNPNYVNRLYINHPDRFRQYGLWERYADLYPDGDLVYTIGESDYTKDWFFAQVTRKS
GQSSYLSTTWQIRFQLDPVDQNGNYKLRIALASASYSDLQVRVNDLNANPPHFWTGIIGK
DNAIARHGIHGLYWLYDVDVRGSWLVEGTNTVFLTQAMNTSPFHGIMYDYIRLEGPTNSD
SNRRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcttcataaacttaggaaagccatatcaaactgctgcacttcaggccaacag
ggtccaatgtcgcctatcggggtccggctatatgttcaagataaatatgttataattgat
aatgggttgttgcaacttacattgtcgaagccggatgggattgttactggaattcaatat
aatggtgtggataatgtgatggaggttctcaacaaagaagacaatagagggtactgggat
catgtttggagtgaacctggaggcaatataatatttgataagataataggtactgatttt
agcataatagctgaagatgataatcaggtggaggtgtcattcacccggatgtgggatcct
tccctaaaagacactacgattgcaccattaaacattgaaaagagttttaggtttgtaatg
ctccgaggatcttcaggattctacacttacggcatttatgagcatttggagggttggcct
gattttgatatgccagaggctcggatagcattcaagcttcgaaaagacaagttccaatat
atggcattagctgacgacagacagaggatcatgccgatgcctgatgaccgtctcccaggg
aggggtaaacaattagcatatccagaggccgtgcttttggtgaatccaatcaatccagag
ctcaaaggagaggtggatgacaaatatcaatactcgatagagaacaaggataacaaggta
catggttggatttctttcgaccctccgatagggttttggcaaattacacctagtgatgag
ttcagaactggtgggcccatcaagcaagatcttacttcgcatgttggtcctactacactt
gctatgtttgtcagtacacattatgccggtgctgaccttgcactacaatttagaggtgga
gaatactggaaaaaggttttcggtccagtgtttatgtatcttaattcttcttggattttt
acagatccacaacttttgtgggaggatgcaaagattcagatgcaaattgaagtagacagt
tggccatataattttcccttctcagaggactacccgacatccgagcagagaggttgcgtt
actggtagactacttgtcagtgataggtatatagacgatgaatacatttatgcaggctat
gcatatgtcggcttggctttaccaggggaaaccggttcgtggcaaagggaaagcaaggga
taccagttctggacaagggctgatgcttttggagaattctcaattagcaatgttcgaatt
ggagattataatctgtatgcatgggttcctggctttgttggagactatagatttgatgca
actattatgttaactgcaggatgtattatcgatttgggtgatcttatatatgagcctcca
agagatggtcctactttgtgggagataggagtccctgatcgctcagccgctgagttcttt
gttccggatcctaaccctaactatgtcaacagactctatatcaatcatcctgacaggttt
aggcaatatggactatgggagaggtatgcagatttatacccagatggagatcttgtttat
actatcggtgaaagtgactataccaaggactggttcttcgctcaagttacacggaagagt
ggtcaaagctcatatctatcgaccacttggcagataagattccaacttgaccctgttgat
caaaatggaaactacaagctacggattgcacttgcatcggcttcgtattctgacttacag
gtccgcgtcaacgacctgaatgcaaaccctcctcacttctggacggggataattggcaag
gataacgcgattgcgagacatgggatccatggtctctactggctgtatgatgttgacgtg
cggggttcttggctcgttgaaggtacgaataccgtatttctgacgcaggcgatgaacaca
agtccgtttcacgggataatgtatgactacattcgcttagaaggacctacgaactccgac
tcaaacaggaggacgtga
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