Asparagus officinalis (garden asparagus): 109848464
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Entry
109848464 CDS
T05243
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109848464
Membrane trafficking [BR:
aof04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109848464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
109848464
NCBI-ProteinID:
XP_020273557
LinkDB
All DBs
Position
7:complement(21147649..21189482)
Genome browser
AA seq
1840 aa
AA seq
DB search
MEDSSSDGSRFRRIPRQLWTSNLELDSVINENLEQWPHLNEVVQCYKADWVKDENKYGHY
ESVAPLSLQNQVFEGPDTDIETEMHLANARQSKTEEATDDDGPSTSGRQINEHFGQSPLP
AYEPTFDWENERSMFFGQRISEALPAQHCSGLKITVKVLSLSFQAGLTEPFSGTICLYNR
ERREKMSEDFYFHVLPTELQDASISSERRGVFSLDAPSASVCLLIQLEKPATEEGGVTSS
VYSRKEPVHLTEREKQKLQVWSRIMPYKESFAWAIVPLFENNNPMASGGSASPSSPLAPS
ISGSSSQDSVVESVMKNTLDGKLAQYSSGSSVIVEISNLNKVKESYTEDSLQDPKRKVHK
PVKGVLRLEVEKLHMTNVDADNLSESGSLTNEPNDAAGRFAEPSSAKYLGNGSDGLRTGN
LKFNASDKKESHRNVPNMIPGSCLDSNSDEVFQAFDFRMMTRNEPFPQLLHCLYLYPLTV
SLSRKRNLFIRVEMRKDDSDIRKQPVEAMCPRNPGGGLQKWAHTQVAVGARLACYHDEIK
ISLPALLTPQHHLLFTLFHVDLQTKLEAPKPVIIGYAALPLSSHIQLQADISLPILRELV
PHYLQDGGKERVDYLEDGKNVFKLRLRLCSTLFPLNERIRDFFLEYDRHILRTSPPWGSE
LLEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDG
ADRNRFLVNYVDYAFDDFGGRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFF
LELIVKSMALEQSRLFYHNLPLGEDIPPLQLKEGVFRCIMQLYDCLLTEVHERCKKGLSL
AKRLNSSLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHECKLTFLQIICDHDLF
VEMPGRDPSDRNYLSSILIQELFLTWDHDDLSQRAKAARILVVLMCKHEFDSRYQKREDK
LYIAQLYFPLIGQILDEMPVFYNLNSIEKREVLVVVMQIIRNLDDATLVKAWQQSIARTR
LFFKLLEECLILFEHKKAADSLLMSCSSRSPDTEGPASPKYSDRLSPAINTYLSEASRQE
VRVQPHGTPENGYLWNRVSPQFSSPSQPYSLREALAQAQSSRIGSSTRALRESLHPVLRQ
KLEIWEENLSTTISLQVLEMTEKFSVAAASHSIATDYGKLDCITSILMSLFSRNQPLAFW
KALCPVFNNIFNLHGATLMARENDRFLKQVAFHLLRLAVFRNDSIRRRAVIGLQILIRSS
FYYFVHTTRLRVMLTITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLEELADEDRSRE
LIRDCGLPACALEAVSEGSTDDRWSWSEVKHLSDSLLQALDAGLEHALLASVMTIDRYAA
AESFYKLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRNDAV
WSRDHVAALRKICPMVSTAVTGEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELHH
FCASILELIIPVYKSRRSFAQLAKCHTSLTNIYESILEQEASPIPFTDATYYRVGFYGDR
FGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDANHTLHIIPDSRQVNAEELQPGVCY
LQITAVDPVMEDEDLGSRRERIISLSTGGVRARVFDRFLFDTPFTKNGKTQGGLEDQWKR
RTVLQTEGSFPALVNRLVVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLH
RLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAI
RVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcttcaagtgatgggagtcgatttcggagaatacctcgtcaactgtggact
tctaatctggagctcgattctgtgataaatgaaaatttggagcagtggccgcatctaaat
gaggtggtacagtgctataaagctgattgggtgaaggacgagaataagtatgggcactat
gaaagtgttgcgcctttgtcattacagaatcaagtttttgaagggcctgacacggacata
gaaacagaaatgcatcttgccaatgcaaggcagtccaaaactgaagaggcaactgatgat
gacggtcccagcacctcaggaagacagataaatgagcattttggccaatctccactgcca
gcatatgaacctacatttgactgggaaaatgaaagatcgatgttttttggacaaaggatc
tctgaagctcttccagctcaacattgcagcggattgaagattactgtgaaggtactatcc
ttgtctttccaggctggattaactgagcccttctctggtacaatttgcctatataacagg
gagagaagagaaaaaatgtcagaggacttctattttcatgttctgccaacagagttacag
gatgctagcatttcttcagaacgtaggggagttttctctttagatgctccttcagcatct
gtttgcctcctcattcagctagagaagcctgctacagaagaagggggtgttacttcatcc
gtttattcacgaaaggaacctgttcatttgacagagagagaaaagcagaaactgcaggta
tggtctcgaatcatgccatacaaggagtcatttgcttgggctattgttccactctttgag
aacaacaatcccatggcgtcaggtggttctgcttcccctagcagtcctcttgctcccagc
atatctggctcaagctcccaagacagtgttgtggaatctgttatgaaaaatactttagat
ggcaagttggctcagtattcaagtggaagttcagttattgttgagatatcaaacttgaat
aaagtcaaagaaagctacacagaggactcacttcaggaccctaaaaggaaggtacacaag
cctgtgaaaggtgtactcagattggaagttgaaaagcttcatatgactaatgtggatgct
gataacctttctgaaagtggaagtctaacaaatgaaccaaatgatgctgctggccgtttt
gcggagccttcttccgcaaagtatcttggtaatggttctgatggattacggaccggtaac
ttgaagtttaatgccagcgataaaaaggaatcacacagaaatgttccaaatatgatacca
ggaagttgtctcgacagcaatagtgatgaagtattccaagcttttgattttcgcatgatg
actagaaacgaaccatttccgcaacttttacattgtctttatctatatcccctgaccgtc
agtttgagccgcaaaaggaatttattcattagggtggaaatgaggaaggatgactctgat
attcgtaaacagccagtagaggccatgtgtccaagaaatcctggcggcggtctccaaaaa
tgggcgcacacacaagttgctgtgggtgctaggctggcctgctaccatgatgagattaaa
atttctcttcctgctcttttgacacctcaacatcatcttttattcacattattccatgtt
gatctccaaacaaagctagaagctcccaagcctgtaattataggatatgctgccctcccc
ttgtccagccatattcagctgcaggctgacatttctttaccaattctaagagagctagtt
ccacattatctgcaagatggagggaaggagagagtggattatctagaggatggaaagaat
gtcttcaaactacgactaaggctgtgctctacattatttccactcaatgagagaattaga
gatttctttcttgagtatgaccggcacatccttcggactagccctccttggggttctgaa
ctcctagaggccattaatagcttgaagaatgttgaatctactgccttgttgcaatttctt
cagccaattcttaatatgcttcttcatttgattggtgatggtggagaaacccttcaggtt
gcagcatttcgagccatggtcaatattctgacacgggtacaacaagagtcctctgacggt
gctgatcggaatcgctttcttgtcaactatgttgattatgcttttgatgacttcggcggt
cggcaagcaccagtttatcctggtttgtcgacggtgtggggaagtctagctcgcagtaag
gcaaaaggctaccgtgttgggccagtttatgatgatgttctggcaatggcatggttcttc
ttggagcttattgtgaagtcaatggcactagagcaaagtcgccttttctaccacaatctt
ccactaggtgaagatattccaccattgcagttgaaagaaggtgtattccgctgtatcatg
cagctttatgattgcctgttgacggaggttcatgaacgctgcaagaagggtttaagcttg
gcaaaacgtctaaacagcagtcttgccttcttttgttatgatctgttgtcaatcattgag
ccacgccaagtgtttgagctggtgtccttgtacatggacaaatttgctggggtctgccaa
tctgtgttgcacgaatgcaagcttacctttttgcagataatatgtgatcacgatcttttt
gtggaaatgccagggcgagatccttcagatagaaattatctctcatctattcttattcaa
gagcttttcctcacatgggatcatgatgatttatctcagcgtgcaaaagctgctcgcatc
ttggtagtcctcatgtgcaagcatgaatttgattctcgctaccagaagcgtgaggataaa
ttatatattgctcagctgtactttcctcttatcggacagatacttgatgaaatgccagta
ttctataatctaaattctattgaaaaacgtgaagtgttggttgtcgttatgcaaatcata
aggaatctagatgatgccacccttgtcaaggcatggcaacaaagcattgctcggaccaga
ttatttttcaaactcctagaagaatgtcttattctctttgagcataaaaaagcagcagac
agtttactcatgagctgcagttctcgtagccctgacactgaaggacctgcttctccaaag
tattctgatcgactgtctccagcaatcaatacctatctatctgaggcttctcgtcaagaa
gttagggtacagcctcatggaactcctgaaaatggctatttgtggaatagagtcagtcct
caattcagctcgccaagccaaccatattctttaagggaagctcttgcacaggctcaatct
tctagaatcggatcttcaaccagggcactgagggaatctttgcatccagtattgaggcag
aagctggaaatctgggaagagaatttaagtaccactattagtctccaggtcttggagatg
actgaaaagttttcagttgctgctgcatcccatagtattgctactgactatggaaaatta
gattgcattacctccatattgatgagcctcttttctcgaaatcagccattggccttttgg
aaggctttgtgtcctgtgttcaataatatttttaatcttcatggtgcgacactgatggca
agagagaatgaccggttcttgaagcaagttgcttttcatcttctaagacttgcagtattc
cgtaatgattccatcaggagaagggctgttattggattgcaaatacttattaggagttca
ttttattattttgtgcataccacacggttgagggtgatgttgacaattaccttgtcagag
ttgatgtctgatgtacaagttacacaaatgaggtcagacggatctcttgaagagagtggt
gaagctagacgtcttaggaaatcattggaagagttggctgatgaagataggagcagggag
cttataagagactgtggcctccctgcctgtgcacttgaggcagtttctgaaggatcaact
gatgaccgttggtcttggtcagaagtcaaacatttgtcagacagtcttcttcaagcactt
gatgcaggattagagcatgccctgttggcttctgttatgactattgatagatatgcagct
gctgagagcttttataagcttgcaatggcgtatgcacctgttccagatcttcacattatg
tggttactgcatttatgtgatgcacatcaagagatgcaatcatgggctgaagctgctcaa
tgtgcagttgctgttgctggtgtgatcatgcaggcccttgttgggaggaatgatgctgtt
tggagcagagatcatgtagcagctttgcgcaagatttgcccaatggtcagcactgcagtg
actggtgaggcatcagctgctgaggtagaaggatatggtgcgtcaaaactgactgtggat
tctgctgtgaagtacttgcagcttgcgaataagctcttttcacaggctgagctacatcat
ttttgtgcgagcatcttggaactcataatccctgtttataagagcaggaggtcatttgct
caacttgctaaatgccacacatccctcacaaacatctacgaatcaattttggagcaggaa
gcaagtccaattcctttcacagatgccacttattatcgggttggattttatggtgatcgt
tttggtaagctagataggaaagaatatgtatacagagagccacgagatgtacgtctaggt
gacataatggaaaagctgagtcacatatatgaatccaggatggatgccaatcacactctt
catataataccagattcccgacaagtaaacgcagaggaattacagcctggtgtctgttac
ctgcagataactgcagtggacccagttatggaagatgaggatttgggcagcaggagagag
aggatcatctctttatccactggaggtgtaagagctcgggtttttgatcgttttttattt
gataccccattcactaaaaatggcaagacgcaaggtggattagaagatcaatggaagcga
cgtactgttctccagacagagggctcctttcctgcacttgtaaatcgtcttgtggttact
aagtctgaatccttagagttctcaccagtagagaatgctatcggaatgattgaaaccagg
acagcagcgctgaggaatgagctggaagaacctcgtagctcagaaggagatcaattacac
aggcttcaaagtttacagagaatacttcaaggcagtgttgcggtacaggtgaatagtgga
gtacttagcgtctgcacggcatttctctctggtgaacctgcaaccaggcttaggtcacag
gaactgcagcagctaattgctgcgcttttagagttcatggctgtatgcaagcgtgcaata
cgtgtccattttagattgattggggaagaagaccaggactttcatactcagctcgtgaat
ggttttcaatccttaacagctgagctttctcactatattcctgccatactatcagagctc
tga
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