Asparagus officinalis (garden asparagus): 109848610
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Entry
109848610 CDS
T05243
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848610
03036 Chromosome and associated proteins [BR:
aof03036
]
109848610
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109848610
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109848610
SLIK complex
109848610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
109848610
NCBI-ProteinID:
XP_020273793
LinkDB
All DBs
Position
7:complement(53330410..53379503)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAFFKNFGNAMDSEYDLNEKGGDNDAEGDYISTEDNRQMDLNFAENGVEMKEEDQYQSEL
EPLDAGVQQNDISSDNGRQGKRTGPSGTWGSNFWKDCQPMWGPKDEEVDGTKDEEVITVN
SDDHSDGQKDSEQFQRGQVDVPADEMLSDDYYEQDGEEQSDSIHGRGLSLPSISGARLPP
RPVLLTKNAAKKSKGAKYDEYDDDDEYEESDDEEEDDPDDADFEPDFGETGKSSKNKAKM
SESDDFDDENDEEEDDDLDLSDEEGIEYGGNPRQRKSQKAGRRPKSTKDSKSSVRSQRKR
GRAFSDEEESSEKDSEQDSDEDFSQKSRKAWQLRKKSGGQSAGSVNINSQSSELRTSGRA
VRKVSYVESEESEKEDEERTTKSQKLLQDDADEEDADSIERVLWHQPKGMAEDAIRNNRS
AQPSVLSTMSDSEPEWDKVEFYIKWKGQSYLHCQWKPFSDLQNVTGFKKVLNYIKRASEE
RKYKVALSREEVEVHDVSKEMELDLLKQYSQVERIFADRISKTSGDDVIPEYLVKWQGLS
YAEATWEKDTDIAFAQDAIDEYKAREEAMTVQGKMVDFQRKKSKASLRKLDEQPAWLKGG
KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNSQQIHGPFLVVVPL
STLSNWAKEFRKWLPEMNIVVYVGNRASREVCQQYEFYTNKSTGRLIKFNALLTTYEVIL
KDKAILSKIKWNYLMVDEAHRLKNSEASLYIALSEFNTKNKLLITGTPLQNSVEELWALL
HFLDPVKFNSKDVFVENYKNLSSFNEIELANLHKELRPHILRRVIKDVEKSLPPKIERIL
RVEMTPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGG
DTSTSDSSKVERIVLSSGKLVILDKLLIRLRQTNHRVLIFSQMVRMLDILAEYLSLRGFQ
FQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQN
DLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKE
SKKGTSMFDKNELSAILKFGAEELFKEDKNDEESKKRLESMDIDEILERAEKIESKEADE
EPGSELLSAFKVANFGSAEDDGTFWSRLIQTEAIDQANEALAPRAARNTKSYAETSQPET
SNKRKRRGLDAPERAQRRSGKGSDSGAHSLPMIEGAFAQVRGWSFGNLTKKDASHFVRAV
KRFGNQSQISLIVAEVGGVIETAPHEAQTELFDMLIDGCREAVREGNMDFKGTLLDFFGV
PVKAYEILNRVEELQMLAKRIKRYEDPVSQFRLTTQHKSPQWSKSCGWNQVDDARLLLGI
HYHGFGNWEKIRLDPRLGLARKIAPVTLGDRETFLPRAPNLDNRASALLQKEFANVNGKL
TKGKGSRKNVNVEAEKLAVSNGRSKDVKLNSRIKKESLQKHQCVEPRVKEEGEISESEQE
NYEQYKEEKWMEWCADVMEEEQMTLTRLERLQTTSLELPKEKVLARIRKYLQQLGKKIDD
IVQQHEASCNQFKQSRMTMRLWNYVSTFSNLTGERLYEIYSKLREEKGGGGVGPSHFNSS
GPGEKGGGGVGPSHFNSSGPEAWKRRRRQGTGNQFQKHLPYPQAPVGNGTRLPEPDNSAG
ILGWGPPELRRFGNDRPKISNPGRFPPR
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcattctttaagaactttgggaatgcaatggattcggaatatgacttgaatgagaaa
ggaggggataacgatgctgagggcgactatatttcaacagaggacaacagacaaatggac
ttgaattttgcggagaatggtgttgaaatgaaagaggaagatcaataccagagtgagttg
gagccgttggatgctggagtgcagcagaatgatatatccagtgacaatggtagacaagga
aagagaacgggcccatctggtacttggggttcaaatttttggaaggattgtcaaccaatg
tgggggcctaaagacgaggaagttgatggtacaaaggatgaagaggtgattacagttaat
tccgatgatcattctgatgggcagaaggatagcgagcagtttcagagagggcaggttgac
gtacctgcagatgagatgctgtccgatgattattatgagcaggatggtgaagagcagagt
gattcgatacatggtcgaggactgagccttcctagtatctcaggcgcaagattgccaccc
agaccagtacttcttactaagaatgcagccaagaaatcaaagggtgccaagtatgatgaa
tatgatgatgatgacgaatatgaggaaagtgacgatgaagaagaagatgacccagacgat
gctgattttgagccagactttggtgaaacaggcaagagctctaagaataaggctaaaatg
tcagagagtgatgattttgatgatgaaaatgatgaagaagaagatgatgaccttgatctc
tcagatgaagaaggtattgagtatggtggtaatccacgacaaagaaagtcgcaaaaagct
ggacgtagaccaaagtcaacaaaagatagcaagtcttctgttcgtagtcaacgaaaaaga
gggagagcattttcagacgaggaggaatcatctgaaaaggactctgaacaggacagcgat
gaagacttcagccagaaatccagaaaagcatggcagttacgtaagaagagtggcggccaa
tcagcaggttctgtgaatatcaattcacagagtagtgagctccgtacatccggtagggcc
gtgaggaaggtatcttatgttgaaagcgaagaaagtgaaaaagaagatgaagagagaaca
accaagtcccagaagcttcttcaagatgatgctgatgaagaggacgctgattcaatcgag
agggtactctggcaccagccaaagggcatggctgaagatgctataagaaacaacagatca
gcgcaacccagtgtcttaagcaccatgtcagactctgaacctgaatgggataaagttgaa
ttctatataaaatggaaaggccagtcatatttacattgtcaatggaaaccattctctgat
ctccaaaatgttactggcttcaagaaggttctgaactacataaaaagagcaagcgaagag
aggaaatacaaggttgccttgtcacgcgaggaggttgaggttcatgatgtcagcaaagaa
atggagttagatctcctcaagcaatacagtcaggttgaaagaatatttgcggacaggatc
agcaaaactagcggcgatgatgtaataccagagtatttagttaagtggcaaggtctctca
tatgctgaagcaacctgggaaaaggatacagatattgcatttgcacaggatgccatagat
gaatacaaggctcgtgaagaagccatgactgtgcaaggaaagatggttgattttcaaagg
aagaaaagcaaagctagcctgcgaaagcttgatgaacaacctgcatggttgaaaggcggt
aaacttcgtgattatcagcttgagggcttgaattttcttgttaacagttggaggaatgat
acaaatgtcattctggctgatgaaatgggtctaggtaaaactgttcagtcagtttccatg
ttaggtttcttgcagaattctcaacaaattcatgggcctttccttgttgttgtacctctt
tcaaccttgtcaaattgggcaaaagaattcaggaaatggctccctgaaatgaatatagtc
gtgtatgttggcaatcgtgccagtagagaggtgtgtcaacagtacgagttttacacgaac
aagagtactggaagattgataaaattcaatgcattgttaactacatatgaagtcatactg
aaggacaaagctatcctctctaagattaaatggaattatctcatggttgatgaggcccac
agactgaagaacagtgaagcatctttgtatattgctctctcggaatttaacacaaaaaat
aagcttcttattaccggtactccattgcagaatagcgtcgaagagctatgggcccttctt
cacttccttgaccctgtcaagttcaatagtaaggatgtttttgttgagaactataagaac
cttagttctttcaacgaaattgagctggctaatcttcataaggagctgaggccacacatt
ctcagaagagttatcaaggatgtggagaagtccttgcctccaaaaattgagcgcatactt
agggtggaaatgactcctcttcagaaacagtattacaagtggattttggagaggaatttt
cacaacctgaataaaggagttcgtggaaatcaggtttcactcttgaacattgttgttgag
ttgaagaaatgctgcaatcatccatttttatttgaaagcgcggatcatggttatggtgga
gataccagcactagtgacagcagtaaagtcgagcgcatagttttgagtagtgggaagctt
gtaatacttgataaactattgataaggttgcggcagaccaatcatcgagtgttaatattc
tctcagatggtgcggatgttggatattctagcagagtatttatcacttagaggattccag
tttcagagattggatggcagtacaagggctgatcttcgtcaccaggcaatggagcatttt
aatgcaccaggaagtgatgatttttgcttcctcctttccacacgtgcaggtggactagga
attaaccttgctactgcagatactgtcataattttcgactcagattggaatccacagaat
gatttgcaggcgatgagtagagctcacaggattggacaacaagatgttgtaaacatctat
cggtttgtcactagtaaaagtgttgaggaggatatattagagcgtgcaaagaaaaaaatg
gttctagatcacctggtgattcagaaactaaatgcagagggaagactggaaaagaaagaa
tcgaaaaagggtacttctatgtttgacaagaatgagctttctgcaatactgaaatttgga
gcagaggagttgttcaaggaggacaagaatgatgaagagagcaaaaagagacttgaaagc
atggatatagatgaaattcttgagagagctgagaaaattgaatccaaagaggcggatgag
gagcctggaagtgaactgcttagtgctttcaaggttgcaaattttggcagtgctgaagat
gatggaacattctggagtcgattgatacagacagaagctatagatcaagctaatgaagca
ctcgctcctcgtgctgcaaggaatactaaaagttatgccgaaactagccagcctgagacg
agtaataaacgtaaaagaaggggtctagatgcaccagagagagctcaaaggcgctcaggc
aaaggttctgattctggggcccactcgttgcccatgattgagggggcatttgctcaagtt
aggggctggtcctttggaaatttaacaaagaaagatgcttctcattttgttcgagcagtc
aagaggtttgggaaccagagccagattagtttaatagtggctgaggttggtggtgtaatt
gaaactgctcctcatgaagcgcaaactgagctatttgatatgttgattgatggctgtcga
gaagcagttagagagggaaatatggatttcaagggaactctgttggatttctttggagta
cctgtaaaagcatatgaaatcctaaatcgtgtagaagagcttcaaatgttagcaaaacgc
attaaacgctacgaagatcctgtttcccagtttagattgaccactcaacataagagtcca
cagtggtctaagagttgtggctggaatcaagttgacgatgcgaggttgcttctgggaata
cattatcatggatttggaaattgggaaaagataagattggaccctaggcttggtcttgca
aggaagattgcccctgtgactcttggggatcgggagacattcttgcctcgtgctccaaac
ttagataatcgtgctagtgctttgttgcagaaggagtttgcaaatgtcaatggcaaactc
acgaaaggtaaaggatctcgtaaaaatgtgaatgttgaagcagaaaaattggcagtatca
aacggtcgatcaaaagatgtgaaattgaattctcggataaagaaagagtcccttcagaaa
catcagtgtgtggagcctcgtgtcaaagaggaaggtgaaatatccgaatccgagcaagaa
aactatgagcaatacaaggaagaaaagtggatggaatggtgtgcagatgtcatggaggag
gaacagatgacactgacacgactagaaaggttgcaaactaccagtttagagcttccgaaa
gaaaaggtacttgctagaattcgtaaatatctgcagcaacttgggaaaaagatagatgac
atagttcaacaacatgaggcatcatgcaatcaatttaaacagtccagaatgacaatgaga
ttatggaattacgtgtcaacattttctaatttgacgggggaaaggctttatgagatatat
tcaaaactcagagaggaaaaaggtggaggtggagttggtccttcccattttaatagttct
ggcccaggtgaaaaaggtggaggtggagttggtccttcccattttaatagttctggccca
gaagcatggaaacgccgaagaagacaaggtacaggtaaccaattccagaagcatctgcct
tatccacaggcaccagttggcaacgggacccggttgcctgaaccagacaactcagcaggg
atcctcggttggggcccacctgaacttagacgatttgggaatgataggccaaagatatca
aatcctggtcggttccctcctagatag
DBGET
integrated database retrieval system
