Asparagus officinalis (garden asparagus): 109848626
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Entry
109848626 CDS
T05243
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109848626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848626
03036 Chromosome and associated proteins [BR:
aof03036
]
109848626
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109848626
Coactivators
SAGA/TFTC/STAGA complex
109848626
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109848626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Put_Phosphatase
DUF7952
Motif
Other DBs
NCBI-GeneID:
109848626
NCBI-ProteinID:
XP_020273824
LinkDB
All DBs
Position
7:120190515..120212355
Genome browser
AA seq
869 aa
AA seq
DB search
MDPSIIRLLEDDEDESMHSGADVEAFTAALNRDIEGNNSSLNQPFDSESRALSKGSNSPS
QHQYGHWQASDQGNSLPQQIQHHGEKLHISQRESSHHVSGSDNQCCPESHLEHDKKQFLP
EKMSIDQQLQSAANPLQFVDNKQIKFSEQNSSHFPPTLEGARHPVSQKNKEQQFNNQQRA
AAPQLNNSIQWITPASIPFQQMIQNLQPHVDKDRYMQLQAVFSKLKSQEMTKENFLRVCK
SIVGDQMIRQAVQQVQMQVHVPAGRPINMNQLSQIQVPSHQSQIQGSTGQIQADASISNI
DTNAQTPQEIENKRELQTARKLLQQMQFPPASFSMYGSTSSFRSHAYPNPSQVRQPTFTQ
GVSSTKSGGSEPMTMVNIPRCELQNASNEKKRLQAGTVSHSTSQHQIPISWQSTNIPNKD
QRTSSSPSISHVKQELFDQDSQPSLKPYFIVSQSLSISSVHTVQGNPNIVPVKYEKQEGK
TAKFGFSESTSLSAPPPVSRPSAIQAGPTAQMQVRNLSATVAGTSPPNKPVTGHKKPLEF
QGSSQLQASKKQKPSGSGALLDQSIEQLNDVTAVSGVNLREEEEQLLSAPKEDSRASEAT
RKFVQEEEDRLILQKEPLQNKLMEIMSKCGIEGMGDNVERCLSVCVEERLQGLINDMIRF
SKQRIDIEKSRHQFVITSDIERQIVAMNQKAKEEREKNQAGEAEKLCNYNDAEVNVGQDA
DKDEGRSKTQKINKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGIVDGP
FGCQHGRTSAKLLTNVGSTSRGQGARKKGTSASMSGGMRMHGRRPGAMSHPEIERILSTK
DLIATLEREPQMSKSTLIFRLYEKMGSAQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccatcattagactgcttgaagacgacgaggatgaaagtatgcattcgggc
gcggatgtggaggcgttcacggcggcgttgaatcgggatattgaagggaataattcttcc
ttaaatcagccctttgattctgaatcaagggcattatctaagggaagcaactctccatca
cagcatcaatatggtcactggcaggcctctgatcaagggaacagtcttccacaacaaata
cagcatcatggagaaaagctgcatatatctcagagagaatcaagtcatcatgtatctggt
tctgataatcaatgttgccctgagagtcacctggaacatgacaagaaacagttcctacca
gaaaaaatgtctattgatcaacaactacagagtgcagcaaatcctcttcaatttgttgat
aataagcagatcaagttttctgagcaaaattcttctcattttcctccaacccttgagggt
gctcggcatcctgtgagccaaaagaacaaggagcagcagtttaacaatcaacaacgagct
gctgctccccaattaaataactccattcagtggattacacctgcttccattccatttcaa
cagatgatacagaatttgcaacctcatgttgataaagatagatacatgcagcttcaagct
gtattttctaaattaaagtctcaggaaatgaccaaggaaaactttttgagagtttgcaag
agtattgttggggatcagatgattagacaagcagttcaacaagtgcagatgcaggtacat
gtgccggcaggtcgtccgataaatatgaaccagttgtcacaaattcaggttccttctcac
cagtctcagatccaaggttcaacaggtcaaattcaggctgatgcaagcatttcaaatatt
gataccaatgctcagacccctcaagaaattgagaataaaagagagttacagacagccagg
aagctcttgcaacagatgcaattcccaccagcatccttctctatgtatggaagtacaagt
agttttcgttcccatgcatatccaaatccaagtcaagtgaggcaacctacatttactcag
ggtgtgtcttcaacaaagtcggggggatctgagcctatgaccatggtaaatattcctaga
tgtgagttgcagaatgcctcaaacgaaaaaaaaagacttcaggcagggactgtttctcac
tcaacaagccaacatcagataccaatttcatggcaatcaacaaatattccaaacaaagac
cagagaactagcagttccccatcaatttctcatgtaaaacaagaattattcgatcaagat
tctcaaccttcactgaagccttactttatagtttcccagagcttatctattagctcagtg
cacaccgtccaaggtaatccaaatattgtacctgtaaagtatgaaaaacaggaaggaaaa
actgcaaaatttggtttctctgaatctacgagtttgtcagcaccacctccagtttcacgt
cctagcgcaatccaagcaggcccaacagcacagatgcaagttcggaatttatctgccact
gttgcgggtactagtcccccaaataaacctgtaactgggcataaaaaaccacttgaattt
caaggaagttcccaactccaagcaagtaaaaagcagaagccatcaggatctggggcactt
cttgatcaaagcattgaacaactcaatgatgtaactgctgttagtggagttaaccttagg
gaagaagaagaacagctgttatctgcacctaaggaggacagccgagcttcagaggcaaca
cgaaaatttgtacaagaagaagaagataggttgattttacagaaggagcctcttcagaat
aagctgatggaaatcatgtccaaatgtggtatagagggaatgggcgacaatgtggagcgt
tgcctttcagtgtgtgtggaggaacggctacaggggctgataaatgacatgataagattt
tcaaaacagaggattgatattgaaaaatcaaggcaccaatttgttatcacctccgatatc
gaacgtcaaatcgtggcgatgaaccagaaagccaaggaggagagggaaaaaaatcaggct
ggagaagctgaaaaactttgtaattataatgacgctgaggtaaatgtggggcaagatgca
gacaaggatgaaggccgatctaagactcaaaagatcaacaaagaagaagatgataaaatg
cgaacaacagctgcaaatgttgctgctagagctgctgttgggggtgacgatatgctctcg
aaatggcagcttatggctgagcaagctaggcagaaacgggaggggatagtggatgggccc
tttggttgccaacatggaagaacaagtgcaaagctattgaccaatgttggtagtacttca
aggggacaaggagccagaaaaaaaggcacttcggcttccatgtctggaggcatgagaatg
catgggaggagacctggagcaatgtctcatcctgaaattgaacgcatcctttctaccaaa
gatttgattgctactttggagagggagccacagatgtcgaagtcaaccttaatcttccgt
ttatacgagaaaatgggttcagctcaatga
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