Asparagus officinalis (garden asparagus): 109848632
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Entry
109848632 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4-like
KO
K10609
cullin 4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109848632
09124 Replication and repair
03420 Nucleotide excision repair
109848632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109848632
03400 DNA repair and recombination proteins [BR:
aof03400
]
109848632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109848632
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
109848632
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109848632
TCR (transcription coupled repair) factors
Cul4-CSA complex
109848632
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109848632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF4813
Motif
Other DBs
NCBI-GeneID:
109848632
NCBI-ProteinID:
XP_020273833
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All DBs
Position
7:complement(140073112..140094161)
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AA seq
818 aa
AA seq
DB search
MTHSKRSFSSINSICPLSSPSSSSSMKKAKSHQLTEKNGLHSYYDVTSGGGGGGGGNAGG
ASEDEDSVLVDQAGVSGSLMTGMASNLLRKKAIPPQPMVKKALKIKLKDKPKLPPSFEED
TWATLKSAITAIFLKKPDPCDSEKLYQAVNDLCIHKMGGNLYQRIQTECEVHISAALMSL
VGQSPDLVVFLSLVVKCWQDFSDQMLIIRSIALYLDRTYVKQTNGVDSLWEMGLKLFEKH
LSNNKEVLHKIVTGLLRLIERERLGEAINKALLNHLLKMFTALGIYADKFEKPFLKGTSD
FYAAESVKYMQQSDVPEYLKHVELRLHEEQERCFLYLDASTRKPLVATAERQLLERHASS
ILDKGFIMLMEAKRVEDLQRMYTLLQKVNALELLKQALGSYIRGTGQGIVMDEEKDKDLV
ACLLEFKTSLDMIWEESFFRNEMFAQTMKDAFEHLINLRQKXTAELIXKFLDEKLRAGNK
GASEEELERTLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTE
CGSQFTNKLEGMFKDIELSKEINDSFKQSSQARMKLPIGIEMSVHVLTTGYWPTYPPMDV
KLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGQCVLKADFPKGKKELAVSLFQTVVLML
FNDTQKLSFEDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGREVEDEDTFAFNEEFS
APLYRIKVNAIQMKETIEENTSTTERVFQDRQYQIDAAIVRIMKTRKILSHTLLITELFQ
QLKFPIKPTDLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgactcactcgaagcgatctttctccagcatcaacagcatttgtcctctctcatcgccg
tcgagctcctcatccatgaagaaagccaagtctcatcagctcacagaaaagaacggcctc
cactcgtactacgacgtcacctccggtggcggcggcggaggcggagggaacgccggcggt
gcgtctgaggatgaggactcggtgctcgtcgaccaggctggggtttcggggagcttgatg
acggggatggcttctaatttgttgaggaagaaggcgattccacctcagccgatggtgaag
aaggcgctcaagattaagctcaaagataagcctaaattaccaccaagttttgaagaagat
acgtgggcaacactgaagtccgctatcacagctatatttttgaagaaaccagatccctgt
gactctgagaagctttatcaggctgtcaatgatctttgcatccacaagatgggaggaaac
ctttaccaacgcattcagacagaatgtgaagtgcacatctctgcagcactgatgtcgtta
gttgggcagagccctgatctcgtggtattcttatcattggtagtgaaatgctggcaggat
ttctcagaccagatgttgattattcgtagcatagccttatacctcgatagaacatacgtg
aaacaaaccaatggtgttgactcattgtgggagatggggttgaagctgttcgaaaaacat
ctctccaacaataaagaagtgttgcacaaaattgtcacaggccttctaaggttgattgag
agggagaggcttggtgaagctataaataaggcattgcttaatcatcttttgaagatgttt
actgcgctaggaatttatgcagacaaatttgagaaaccttttcttaaaggcacttctgac
ttttatgctgctgaaagtgtgaaatatatgcagcagtcagatgttccggagtatctgaaa
catgtggagttaagattgcatgaagagcaagaaagatgttttctatacttggatgctagt
acgaggaagccacttgtagcaactgccgaaaggcagcttcttgaacgtcacgcatcttca
atccttgacaagggtttcataatgcttatggaagctaagcgtgtggaagatcttcaaaga
atgtacactctgctccagaaggttaatgctcttgagttattaaagcaagctcttggttca
tatatccgcggtactggacagggtattgtcatggacgaagaaaaagacaaagatttggtt
gcttgcctcttggagttcaagacatctcttgacatgatatgggaagagagtttcttcaga
aatgaaatgtttgcacaaaccatgaaggatgcatttgagcaccttatcaatcttcggcag
aaataaactgctgaactaatttaaaagtttctagatgagaaacttcgtgctggcaataag
ggtgcttctgaggaagagttggaaaggacacttgagaaagtgttggtattgttcagattt
atacagggcaaagatgtttttgaggctttctacaagaaggatcttgcaaaaaggttattg
ctgggaaagagcgcctcaattgatgctgaaaagtcaatgatctcaaaactcaagactgag
tgtgggagccaatttactaataaactggaaggcatgttcaaggacattgaattatcaaaa
gaaataaatgattccttcaaacagtcatcacaagccaggatgaaacttcctattggcatt
gagatgagtgttcatgttctaacgactggatactggccaacatacccacccatggatgtt
aagcttcctcatgaattgaatgtttatcaggatatatttaaggagttctacttaagcaag
tacagtgggagacggttaatgtggcataattcattaggtcaatgtgttctaaaagccgac
ttccctaaaggtaaaaaagaattggcagtgtcattgttccagactgttgtcttgatgctg
ttcaatgacacccaaaagctcagctttgaagatattaaggactccacgggtattgaagat
aaagagctgaggaggactttgcaatctcttgcatgtggcaaagttcgtgtgctccaaaag
tttccaaagggaagagaagtagaggatgaagatacatttgcattcaatgaagaattcagt
gctcctttgtaccgcatcaaggtaaatgccattcagatgaaggagacaatagaagagaac
acaagcactacggaaagagtattccaggatcgtcaatatcagattgatgcagctattgtt
cgaataatgaagacaaggaaaatactaagccacacacttttaataaccgagctttttcaa
cagctcaaatttccgataaagccaacggacttgaagaaaaggatcgagagccttatagac
agagaataccttgagcgagacaagaacaatccgcagatatacaactatttggcttaa
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