Asparagus officinalis (garden asparagus): 109848653
Help
Entry
109848653 CDS
T05243
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109848653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109848653
03400 DNA repair and recombination proteins [BR:
aof03400
]
109848653
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109848653
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109848653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
LptD_2
Motif
Other DBs
NCBI-GeneID:
109848653
NCBI-ProteinID:
XP_020273860
LinkDB
All DBs
Position
7:complement(42042649..42065253)
Genome browser
AA seq
1244 aa
AA seq
DB search
MLKSRSSSSSSDKIFDGVRFVLFGFDSVSESQYRSEIVRRGGIDVGRYDDSCTHVIVSGR
IYDDPVCVSARKDCKTLVTDLWIDDSVDFGTLADASRVLYRPVKDLNGIPGSESLYICLT
GYQRPERDDIMKMVSLMGAKFSKPLIANQVTHLICYKFEGEKYELAKKVKIKLVNHRWLE
DCLKAWDILPIDNYTKSGWELEVLEAEARDSEEETEDVGMELMGQRNTGGAPCEQGQMSV
AASSHVHTPNKGSLSIRQEGSIANRSHSVIARSHEHTPNRGSLSIQQEGSTANLPHSAEN
LPADQWLSTPYKETSFEEALSKQNLKSNVEIDHQEAGGVARKSDNNAMKDGELTVPVDVS
LQKRDNITLSDVLTTKIGSVSSRQERSSTLCYSKRTPKKEIAREKPSDSCRTELNENILN
GELDISPLEGRSRLDHFQFPTASCVLPQKRKVSDFSSIKSSELEVHDPKISPKSPTNTRF
ERLKPTSATSIHYGHADASSTLEGAAKTNSEVYQHGAPIKLTSLSYNRRSLKRGQPTSES
KFSRNADSPSTGCTQNCQQGEAWDQPSGVKVKLAVETKELCPSISPSEDRVLEDMAPSFK
PKNTMEADAGFGNVVSGVNNLASAGRNNDVNPIEEMASETSGGSRQSQEIGKSENDGDIV
MRDNSTFMANETGVPLGRQHNGGAASPSSRKTRKLSRTASTGTCKENVNEESKIVHRKKV
VSRRNLIWKPQLTTVNTLKGKDASTLDKATAPRKVESKPGKAEKSNSDIELGMEAVNDNK
EATKSFSKDVVMEHQTKPKRDPLDQTEASVDLEKDNNPKENATLASNVNAHANSKVPCED
GRKSRQGTKRVRAKNCKKELVGQMEAAMDPEKENKPKENGTLASNVNSHGKVPCDDRNNS
RQGTRRVGAKTNTDQTISCTRTVNPEPVWFILSGHRFQRKEFQAVIRRLRGKVCRDSHNW
SYNATHFIVPEPVRRTEKFFAAAAAGRWILKMDYLTASNEAGKFVNEEPFEWYGNDLTEH
GAISLEAPRKWRKLREKTGHGAFYGMCIIIYGDCISPTLDTLKRVVKAGDGTILATSPPY
TRFLKSNVDFAIVSPGMPKVDSWVQEFLRHEIPCVAADYLVEYICKPGYPLKMHVLYNTH
SWAEKSYANLLRRSEEIITDDCSPLEESVDDISCSVCGLNDRGEVMLMCGYEDGSVGCGI
GTHIDCCNPPLEAVPEGDWFCTKCSRDREPKIPLRIKKTSSKCK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagccgctcgagttcgagtagctctgataagatcttcgatggcgttcgattc
gttctgtttggatttgattccgtctctgaatctcagtaccgatctgagattgtacggaga
ggtggaatcgatgttggtagatatgatgatagctgtactcatgtgattgtctccggtcgt
atttatgatgatcctgtttgtgtttctgctagaaaagattgcaaaacacttgtgactgat
ctttggattgatgatagtgtggattttgggacacttgctgatgctagccgggttttgtat
aggcctgtaaaagatttgaatggaattccgggcagtgagtcgctatacatttgcctgaca
ggatatcaaaggccagaacgtgatgatattatgaaaatggtttccttgatgggggcaaaa
ttctccaagcctttgatagcaaaccaagtcacacatcttatttgctacaaattcgagggt
gagaagtatgagcttgcaaagaaagtgaaaattaaacttgtaaatcatcgatggctggaa
gactgcttgaaagcatgggatatcctgccgatagataattatactaaaagtggatgggaa
ttagaggttttggaagctgaggctagggattcagaagaagaaacagaagatgtaggtatg
gagttgatgggacagagaaatactggaggagctccatgtgaacaaggtcagatgtcagtt
gctgcaagttctcatgtgcatactcctaataagggaagtctcagcattcgtcaagagggt
tcaattgcaaatcgatcacattcagttattgcacgttctcatgagcatacccctaacagg
ggaagtctcagcattcaacaagagggttcaactgcaaatcttccacattctgctgagaat
cttccagcagaccagtggctttcgactccatacaaggagaccagttttgaagaggctctt
tctaagcaaaacctaaagagcaatgttgagattgatcatcaggaagctggaggtgttgcc
cggaaaagtgataataatgctatgaaagatggggaattgacagtaccagttgatgttagc
ttacagaaaagggataacatcactttgtctgatgtactgacaacaaaaatcggttcagtg
tcaagcagacaagagagatctagcacgttgtgctactctaagagaactccaaagaaagaa
attgcaagggaaaaaccatctgattcatgcagaacggaattgaatgaaaacattttaaat
ggtgagcttgacatctcaccattagaaggaagaagcaggcttgatcactttcaatttcca
acagctagttgtgtcttgccgcagaaacgtaaggtttctgatttcagcagtataaaatct
tctgaactggaagttcatgatcctaaaatttctccaaagagtcctacaaatacgagattt
gaacgactcaaacctacttctgcaacatcaatacattatggccatgctgatgcaagcagt
acattggaaggagctgctaagacaaattctgaagtttaccaacatggtgctccaataaag
cttacctctttgagttacaataggagatccctaaaaagagggcagccaacttctgagtcc
aaattttccagaaatgcagattctccttcaactggatgtacgcagaattgtcaacaagga
gaagcatgggatcaaccatcaggcgtaaaagttaagttagcagttgaaacaaaagaatta
tgtccttcaatttctccatctgaagacagagtgctagaagatatggcccctagtttcaag
ccaaaaaacacaatggaagctgatgcaggttttggtaatgtggttagtggtgtaaataat
ttggcctccgctggaagaaataatgatgtaaaccccatcgaagagatggcatctgagact
tctggtggctcaaggcaatctcaggagattggtaaatctgaaaatgatggtgatattgta
atgcgagataattcgacattcatggccaatgaaactggggtacccctgggaaggcagcac
aacggtggagctgcatcgcctagtagtaggaaaaccagaaagctctcaagaactgcaagt
actggcacatgcaaggaaaatgttaacgaagaatcaaagattgtacacaggaaaaaggta
gtttctaggagaaatttgatctggaagcctcagttaactacagtaaacacccttaagggt
aaagatgctagcactttggataaagctaccgctccaagaaaagtggagagtaaaccaggg
aaagctgaaaaatcaaattcagatatagaacttgggatggaggccgtcaatgataataaa
gaagcaaccaagtcattttccaaggatgtagtcatggaacaccagacgaaaccaaaacgg
gatcctttggatcagacagaggcatccgtggaccttgaaaaggataataatccaaaagaa
aatgccaccttagcttcgaatgttaatgctcatgctaatagtaaggttccttgtgaagac
ggaagaaagtcaaggcaagggactaaaagagttagagcaaagaattgtaaaaaggaactt
gtgggtcagatggaggcagccatggatcctgaaaaggagaataaaccaaaagaaaacggt
accctggcttcgaatgttaattctcatggtaaggttccttgtgacgacagaaataattca
aggcaagggactaggagagttggagcaaaaaccaatacagatcaaacaatcagttgtaca
agaactgtaaaccctgaacctgtgtggtttatattaagtgggcatcgtttccagaggaag
gagtttcaggcagtgattaggcgtttaaggggaaaagtctgcagggattctcacaattgg
tcttataatgctacacattttattgttcctgaacctgttcgcagaaccgagaagttcttt
gcagctgctgcagctggaagatggattctgaagatggattacttaacagccagtaacgag
gctggaaaatttgtgaatgaagaaccttttgaatggtatggtaatgacctcacagagcat
ggtgctatcagtttggaagctccacggaagtggcgtaagttgagggaaaagacaggccac
ggtgccttctatggaatgtgcattatcatatatggagattgcatttcgcccacattggac
acattaaagcgagtggtaaaagctggagatggcaccattttagcaacctcgccaccatac
actcgctttctcaagtctaatgtagattttgcaattgttagtccaggcatgcctaaggtc
gattcttgggtccaagagttcttgcgacatgaaattccgtgtgtggcagctgattacctt
gtggagtacatctgcaagcctggctaccccttgaagatgcatgtgctatacaacacacat
tcttgggcagagaaatcatatgcaaatttgttgaggcgatcagaagagattatcactgat
gattgttcgcctttggaagagagcgttgatgatatcagttgttctgtgtgtggattgaat
gatagaggggaagtgatgttgatgtgtgggtatgaggatggttctgttggatgtgggatt
ggtactcatattgactgttgtaatcctccacttgaagctgtacctgagggggattggttc
tgcactaaatgcagtagagatcgtgagccgaagattcctcttaggattaagaaaacttca
tcgaagtgtaagtag
DBGET
integrated database retrieval system
