Asparagus officinalis (garden asparagus): 109848811
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Entry
109848811 CDS
T05243
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109848811
03400 DNA repair and recombination proteins [BR:
aof03400
]
109848811
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
109848811
DNA replication proteins [BR:
aof03032
]
Prokaryotic type
DNA Topoisomerases
109848811
DNA repair and recombination proteins [BR:
aof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
109848811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LRRFIP
STAT_alpha
Motif
Other DBs
NCBI-GeneID:
109848811
NCBI-ProteinID:
XP_020274079
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Position
7:11784822..11804058
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AA seq
925 aa
AA seq
DB search
MALSTMLRFTTSSLLRSRLSTPLLAVVSTPNSLRFYSPNPKRSLKVRSSKRRSNEEPVLD
KGEGGENGGLLLKEKSGRVGDGRIVPAELHKEATEAYMAYAMSVLLGRALPDVRDGLKPV
HRRILYAMHELGLSSRKPHKKCARVVGEVLGKFHPHGDNAVYESLVRMAQDFSLRFPLIR
GHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLELDTVDFVPNFDNSQKEPSLLPARI
PNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEHMPGPDFPTGGLI
MGNIGILEAYRTGRGRVVVRAKTDMEVLDEKTKRTAIIIKEIPYQTNKSALVEKIAELVE
DKTIEGISDIRDESDRSGMRIVIELKRAADPSIVLNKLFRHTALQSSFSCNMVGILNGQP
KLMGLKELLQAFLDFRCSIIERRAKFKLSQAEQRRHIVEGIIVGLDNLDGVIHIIKETSS
NAMATTALMKEYHLSEKQAEALLDITLRKLTSFERKKFVDEHNSLTEQISKLNELLLSKK
LIFQLIEQEAIEIKNKFGTPRRSLLEDASAGQLEDIDVIPNEEMLLAFSEKGYVKRMKPN
TFNLQHRGTIGKSVGKMRVNDSMSDFLVCHAHDHILYFSDRGIVYSARAYRIPECTRNAA
GTPLVQLLSLSEGERITSVIPVSEFPGDQYLLMLTVNGYIKKVSLNAFSAIRVTGIIAIQ
LVPGDELKWVRRCADDDLVVIASQKGMVIVNSCNTLRAYGRNTRGLISMRLKEGDKMAAM
DIIPAAIHKDRKQLNKDSVNQSRDVRPPWLLFVSESGRGKRVPLSSFRESNFNRVGLRGY
KIPADGRLAAVFVVGFSLADDGESDEQLVLVSQSGTINRIKVRDISIQSRVARGVILMRL
EHAGKIQSASLISAMEDEVLAEDQV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcgacaatgctccgcttcactacctcctctctcctccgttcccgcctctcg
acccccctcctcgccgtcgtctcaacccccaacagcctccgcttctactcgccaaaccct
aaaagatcgcttaaagttcgatcatcgaagcgcaggagtaacgaagaaccagtcttggat
aagggagaaggtggggagaatgggggtttgttgttgaaggagaagagtggtagggttggt
gatgggagaatcgtgccggccgagcttcacaaagaggcgacggaggcgtacatggcgtac
gcgatgtcggtgctgcttgggcgagcgctgccggatgttagggacgggctgaagccggtt
catagaaggatactgtatgccatgcatgaattgggcctctcatctcgaaagccacacaag
aaatgtgctagggttgtaggagaggttttaggtaagttccatccccatggagacaatgct
gtttacgaatctttagtgagaatggcacaggatttctctttgcggtttcctcttattcgg
gggcatggaaactttggatcaattgatgctgatcctcccgcggccatgcgctacactgaa
tgtagattggaagcacttacagaagcgatgctattaactgacttggaacttgatacggtt
gactttgttccaaattttgataattcacaaaaagaaccatccttgttacccgctcgcatc
ccaaatttgttgttgaacggatcttctggaattgcggttggaatggcaactaatattcca
ccacataatcttggggaacttgtggatgcactttctgctttgatccgtaatccagaagct
acactccaagaattgttggaacacatgcctggacctgacttcccaactggaggactaatc
atggggaatattggtattttagaggcatatagaactggacgaggacgcgtagtcgtgaga
gcaaagactgatatggaagtgctagatgagaaaacaaaacgcactgccataataattaaa
gagattccttaccaaaccaataaatccgcgctggtcgaaaaaattgcggagcttgttgaa
gataagaccatagaaggcataagtgatattcgtgacgagagtgaccgttccggtatgcgc
atagttattgagttaaaaagagctgcagatccatcaatagtccttaataagcttttccgt
catacagctcttcaatctagctttagctgcaacatggtaggtatcctcaatggtcagcca
aagctaatgggcttgaaagaattgcttcaggcctttcttgattttagatgctccatcatc
gaaaggcgtgccaaatttaagctctcacaggcagaacaaaggagacatattgtagagggc
atcatcgtgggtcttgataatttggatggagttatacatataatcaaagaaacatcaagc
aatgcgatggcaacaactgctttgatgaaagaatatcacttatctgaaaaacaagctgag
gctttattggatattaccttaagaaaactgacttcttttgagagaaaaaaatttgtggac
gaacataactctttgacagaacaaatttccaagctaaatgagctcttgctaagtaaaaaa
ctcatattccagctcatagagcaagaagcaattgaaattaagaacaaatttgggactcca
aggcgctcattgctggaagatgctagtgcaggacaacttgaggatatagacgttattcca
aatgaagaaatgcttctggcattcagtgaaaaaggctatgttaagcggatgaagcctaac
acatttaacctacaacatcgtggaactattggaaaatctgttggaaaaatgcgagtaaat
gactcaatgtcagacttccttgtctgtcatgcccatgaccatatcctttatttcagtgat
aggggaatagtttattcggctcgtgcatatcggatacctgaatgtactcggaatgctgca
ggaactccattggtccagttgttgtcactatctgagggagaaaggataacctctgtcatt
cctgttagtgaatttcctggagaccagtacctactaatgcttactgtcaatggttacatc
aagaaagtttctttaaatgccttctcagcaatcagagtaacaggaattatagcgatacaa
ctggttcctggtgatgagctgaaatgggtgcgccgatgtgcggatgatgatcttgtcgtg
atagcttctcagaaggggatggttattgtaaattcatgtaatacgcttcgggcatatggg
agaaatacaaggggtcttatttccatgagattgaaggaaggggacaaaatggcagcgatg
gacataatacctgctgctatccataaagatcggaaacaattaaacaaagactctgtaaac
cagagtagggatgttcgacctccatggctgttattcgtgtcagaaagtggtcgtggtaag
cgtgtgcctctgagtagcttccgtgaatcaaattttaacagagtgggcttgagaggttac
aagattccagcagatggtcgactagctgcagtttttgtggttgggttttcactagcagat
gatggtgaaagcgatgaacaattagtcttagtcagccaaagtggaaccataaacagaata
aaggttcgagatatatctattcaatctcgggtggcaaggggagttattttgatgcggtta
gagcatgctggaaaaatccaatctgcttccttgatttctgcaatggaagatgaagtgctg
gctgaagatcaagtatga
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