Asparagus officinalis (garden asparagus): 109848861
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Entry
109848861 CDS
T05243
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109848861
03036 Chromosome and associated proteins [BR:
aof03036
]
109848861
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109848861
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109848861
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109848861
microRNA pathway
RISC loading complex
109848861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
109848861
NCBI-ProteinID:
XP_020274159
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All DBs
Position
7:34216392..34227602
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AA seq
916 aa
AA seq
DB search
MDPLNGEGQDALPPPPPIIPPGVVPVKADQGQDSPPRKPSTPKRVPMARPGLAKRGQPVQ
LLTNHFKVSVRNVDDYFYHYSVVIKYEDDHPVDGKSVGRQVIDKLRQTYDSEIGNKDFAY
DGEKSLFTLGSLPQVKNEFTVVLENTSSNRAAGNGSPRGNESPGENERKRTRRPYQTKAY
KVELNFAAKIPMQAIAIALKGHDTENSQEALRVLDIILRQNAAKQGCLLVRQSYFQNNPS
NFTDIGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIVKPGPLVDFLIDHQKVRDPFQID
WGKAKRTLKNLRIKTSPSNTEGKIVGFSELPCNQQLFTLKQRTGKDSNGDFDAQATEITV
YDYFVKHRNIELRYSGDLPCVNIGKPKRPTYIPIELCSLVSLQRYTKALTTIQRSSLVEK
SRQKPQERMSVLSNALKHNNYDADPMLRACGVSISSQFTQVDGRILPAPKLKVGNGEDFL
PRNGRWNFNNKKLFEATIVDKWAVVNFSARCDMRNLVRDLIKCGNMKGIQVDDPFVILEE
NHSMRNAPPPARVEDMFEQIKSKLPGAPKFLLCLLSERKNSAVYGPWKRKCLAEFGIVTQ
CIAPQRVNDQYLTNVLLKINAKLGGINSLLVQERMTKIPFVSASPTIILGMDVSHGSPGH
SDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDSLFKPSGSDDDGIIRELLIDFYTS
SGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWCPKFTLIVAQKNHHTKF
FQPQSPDNVPPGTVVDNKVCHPRNYDFYMCSHAGMIGTTRPTHYHVLHDEIGFAPDDLQE
LVHSLSYVYQRSTTAISVVAPVCYAHLAATQMSQFMKFDDLSETSSSHGGMTAPGAIPVP
ELPRLHEKVSSSMFFC
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatcccctaaatggcgaaggacaagatgcattgccacctccaccaccgatcataccg
cctggtgtagtaccagtcaaagccgaccaggggcaagattcaccccctagaaagccctca
acaccaaagagggtaccaatggcaagacctggcttggctaagagaggtcagcctgtacag
ttgctaactaatcatttcaaagtatcagttcggaatgtggatgactacttttaccactac
agtgttgtcattaagtacgaagacgaccatcctgtggatggaaagtcggttggcagacaa
gttattgacaaattacgacagacctacgacagcgagattggtaacaaggattttgcatat
gatggggagaagagcttgttcacactgggttccctcccgcaagtgaagaatgagtttact
gttgttctggagaacacatcgtcaaatagagctgctggaaatggaagccccaggggaaat
gagagcccgggtgaaaatgaacgcaagcgcacgaggcgaccataccagacaaaggcctac
aaggttgagctgaattttgctgcgaaaatcccgatgcaggccattgccattgctttaaaa
ggacacgacaccgagaactcccaggaagcacttagggtgcttgatatcatcctcaggcag
aatgctgcaaagcagggctgcctgctggtccgacagtcatatttccagaacaatccttca
aattttactgacattggcggtggagttttgggttgccgaggcttccactccagtttccgg
acctcccaggggggtttatcattgaacatagatgtttcaacaacaatgatagttaaaccc
ggacctcttgtcgattttcttattgaccaccagaaagtccgagatcctttccaaatcgac
tgggggaaggcgaagcgaacactaaaaaatttgaggataaagacgagcccatcaaacaca
gaagggaaaattgtcggtttcagtgaattaccttgcaatcagcaattatttactctgaag
caaagaactggtaaagatagtaatggagatttcgatgcccaagcaaccgagattacagtt
tatgattattttgtaaaacatcgtaacatagagctcaggtattctggtgatcttccgtgc
gtaaatatcggaaagccaaagaggcctacttatatccctattgagctgtgctccctagtt
tcattgcaaaggtatacaaaggctttaaccacaatccaaagatcctcacttgttgagaag
tccagacaaaagcctcaagagagaatgtctgttttgagcaatgcactgaagcacaataat
tatgatgctgatcctatgctcagagcttgtggtgtttctattagtagtcagtttacccaa
gtagatgggcgtattctaccagcaccaaagttgaaagttggtaacggtgaagattttttg
cctagaaatggcagatggaattttaacaataagaaactctttgaagcgacaattgtagat
aagtgggctgtggtcaatttctcagctcgctgcgatatgagaaatcttgttcgtgatctt
attaaatgtgggaacatgaaaggaatccaagtggatgatccatttgttattcttgaggaa
aatcattctatgagaaatgcccctcctccagcaagagtggaggatatgttcgaacagatt
aagtcaaagctacctggagcccccaaatttttactttgtctcctatctgagcgcaaaaat
tctgctgtttatggaccgtggaagcggaaatgcctggctgaatttggaatagttacacaa
tgcatagcgccacaaagagttaatgaccaataccttacaaatgttctacttaagatcaat
gcaaagcttggtggaattaactctttgttagtacaagagcgaatgacaaagattcccttt
gtctccgcctctccaacaatcatattaggcatggatgtttctcacggctcacctggacat
tctgacgttccatctattgctgcggttgttagttcacgacagtggccttctatttcccgt
tacagagcttctgtaagaacccaaagcccaaaggttgaaatgatagattctctgttcaag
ccatcagggtctgatgatgatgggattatccgggaacttttgatagatttttacacgagt
tctggtaaaaggaagcctgaccaaattattattttcagggacggtgtcagtgagtctcaa
ttcaatcaggtgttaaacattgagctcgatcaaattattgaggcatgcaaatttcttgat
gaaaattggtgcccaaagtttacgttgatagtagctcaaaagaatcaccatactaagttt
tttcagcctcaatcacctgataatgttccacctggtactgttgttgataataaagtttgt
caccccagaaactatgatttctatatgtgctctcatgcagggatgattggtacgacacgc
ccaacacactaccatgtattgcatgatgaaatcgggtttgcacctgatgatctccaagag
cttgttcactctctatcttatgtgtatcagaggagcacaacagctatctccgtcgttgct
cctgtttgctacgcacatttggccgctactcaaatgagccagttcatgaaatttgatgac
ttgtctgagacttcctcgagccatggagggatgactgctcctggggccattccggtgcct
gaactgccacgtctccatgaaaaggtgagcagctcaatgttcttctgctga
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