Asparagus officinalis (garden asparagus): 109848894
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Entry
109848894 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848894
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109848894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF1367
Motif
Other DBs
NCBI-GeneID:
109848894
NCBI-ProteinID:
XP_020274202
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All DBs
Position
7:17832727..17838330
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AA seq
355 aa
AA seq
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MEKELVQTFEAAKKAADAAAGGRGAPEEDRCVDALKNLRKLPFPWTFLXRPQVGKQLRTL
TKHPHKRIQAVASDLLKFWKNVVIEETAKTDKKNGGSNGSSEADVKSEKAEVVKVEKTSK
TVTGINTLSRSESIKGEKGTSNNGIKIERISKAETVKVERTNGAQEVPKLTSVVKCKDSV
RDKLREILAEAFSRVYKETSESERDEVKSILDEVEACDPLRTAVTVESAMYEKLGSSTGS
HKMKYRSIMFNLKDSKNPDFRRRVLLGQVQPEKLVDLMPEDMASDERKLANKQIKEKALF
ECERAGAPKATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctcgtgcagacgttcgaggcggcgaagaaggcggcggatgcggcggcg
ggaggacgcggagcgccggaggaggatcgatgcgtcgacgccctcaaaaacctcaggaag
ttgccgtttccatggacattcttgtgaagaccgcaggttggtaaacaactccgtactctt
acaaaacatccccataaaaggattcaggctgtggcttctgacttgttgaagttctggaaa
aatgttgtcattgaagagacagcgaaaactgataagaaaaatgggggctccaacggctcg
tcagaggctgatgttaaatctgaaaaggcagaggttgtcaaagtagagaagacctcaaaa
acggttactggaatcaacacattatcaaggtcagaaagtatcaagggggagaaaggtact
tctaacaatggaataaaaattgagaggatatcaaaagctgaaactgtaaaggttgagagg
acgaatggggctcaagaagttccaaaattgacatcagtggtcaagtgtaaggattccgtg
agagataaactccgagaaattcttgcagaggccttctctagagtttataaggagacgagc
gagagcgagagagatgaagtgaagagcatcttggatgaagtggaagcctgtgacccgctt
cgtacagctgtcactgtagaatccgctatgtacgaaaaattagggtcttcaactggatct
cacaagatgaagtacagatcaataatgttcaatctcaaggacagcaagaatcctgatttc
agaagaagggttctccttggtcaagtccagcctgagaaacttgttgatttgatgccagaa
gatatggcgagcgatgagaggaaacttgcgaataaacagattaaagagaaggcgttgttt
gaatgtgagagagcaggtgctcccaaggctaccactgatcagttcaagtgtgggcgatgt
gggcagcgaaagtgcacatattatcagatgcagactcggtcagctgatgaacctatgaca
acttttgttacttgcgtgaactgcaataaccattggaagttctgttaa
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