Asparagus officinalis (garden asparagus): 109848932
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Entry
109848932 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109848932
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109848932
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109848932
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109848932
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109848932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
109848932
NCBI-ProteinID:
XP_020274251
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All DBs
Position
7:63487217..63492846
Genome browser
AA seq
202 aa
AA seq
DB search
MSPVKEVRYTSRSITPPPRRRSRSISPPPSRARTRSRSQDSGDANNPGNNLYITGLSTRV
TSSDLEKYFNKEGQVLECQVVLDPRSRESRGFAFVTMETAEDADRCIRHLHRSVLEGRLI
TVERAKRRRGRTPTPGKYCGSRERRDSGCKRTRSRSPYRSRQRDDSHYRGRRERSRSPHS
RDSHRRRRERSLSASAEDKSAD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgtaaaagaagtaagatacacatcccgctccattactcctcctccaaggaga
cggagcagatcaatttcaccgccaccgtccagggcgaggactcgttctaggagccaagat
tctggggatgcaaataatcccggaaacaacttgtatataacaggcctgtccacaagagtt
accagtagtgaccttgagaagtatttcaacaaagaaggacaggttctggaatgccaagtg
gtccttgatcctcgttcaagggaatctcgtgggtttgcatttgtaactatggagactgct
gaagatgcagaccgctgcattagacacttacatcgttctgtacttgaaggtcgcttaata
actgtggaaagggctaaaaggaggcgaggcaggacacctactcctggaaaatactgtggt
tcaagagaaagacgagatagcggttgtaaaaggactcgcagccgttctccttatcgatca
cgtcaaagagatgactcacactacaggggccgacgtgaaagatctcgctctcctcattca
agggattcacatagaagacgcagggagcgatcactttcagcttcagctgaagacaagtca
gcagattag
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