Asparagus officinalis (garden asparagus): 109848947
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Entry
109848947 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: DNA helicase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109848947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aof03036
]
109848947
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
109848947
INO80 complex (yeast)
109848947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
109848947
NCBI-ProteinID:
XP_020274276
LinkDB
All DBs
Position
7:52709732..52723271
Genome browser
AA seq
1524 aa
AA seq
DB search
MEPRRQQQNGLSYDNLFNLEPLMNFRLPKPSEEFDTYGSSSQEESTSSQGQGAMTGYSNG
SMTDRSSGHTKKQKRRGFELETGLSPYGRRDADSNDQDDEDYNTRISEDHYRSMLSDHVQ
KYRKVRVPDSSVPNVRRNHSSKAGKFTHEPFVKEEAMFREMDNSPEYFDADFESDYGGEN
KYGSPLDSSYLDIGEGITYRIPPTYDLLVTSLNLPSFSDIRIDEYFLKGTLDLRSLAAFV
ASDRKFEARNRGGLAEPQPQYESLQARLKALSASNSNQKFSLKVCDDHLDSIPEGAXESG
NLQVYYVRVMEKGDTFEIIERALPKKQIVKKDPSVIEKEEMDKIAKVWVNIVRRDIPRHH
RALTNLHKKKIGDAKRFSETCQREVKLKVGRSIKLMRGAAIRTRKLARDMLLFWKRVDKE
QAEVRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKSSQPSESLPTV
DDESTIPEEPSAAAVQPGEEEDPEEAELRREALKAAHHAVSQQKKITNLFDSECLKLRQA
AETTDVTDDPAISGSSNIDLLNPSTMPATSSVQTPTLFKGSLKEYQLKGLQWLVNCYEQG
LNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPSSVLNNWADEISRFCPDLKTL
PYWGGASERLVLRKNINPKRLYRRDAGFHILITSYQLIISDEKILKRVKWQYMVLDEAQA
IKSSQSQRWRTLLTFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKG
IESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVITEMTSKKEVTVHCKLSSRQQAFYQ
AIKNKISLAELFDSNRGHLTDKKLVNLMNIVIQLRKVCNHPELFERNEGSSFLYFADVPN
SLPPPPFGELEDVYYSGDLNPISYKVPKLVYQETIRNFERSCSVMGHDVQNNTFERLFSI
YSPESIYRSAVSQFSDEYSLTTGTFGFTRLMDLSPAEVSFLAQCSLLEKLMFSVKRWDKQ
FVDEVVDLFMNLEGGDAQYDQLEESKVRTVARMLIIPTKSEASMLRKKHATGPNDAPFEP
LVISHNERYMSNISMLRSSYAFIPKARAPPISAQCMDRSFAYQTVEELHHPWAKKMFLGF
ARTSEFNGPRMPTAPHHLIEEVNTESSYQPMLELTHRIFGSSPPMQSFDPAKMLTDSGKL
QTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYKYFRLDGSSSIMDRRDMVRDF
QQRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKEVTVYR
LICKETVEEKILQRASQKNTVQQLVMTGGHVQGEILKPEDVVSLLLDDAQLEQKLREIPL
QVKDRQKKKKPPKGIRVDADGVVSLEDFDNPVQQDADYGEQQNGSAANKKRKLRPDNQTP
KPRSHSKSKNNNTGMEIDEVQPTEYEKDDNIEQRPTRPKRTKKSVNENLEPAYNSAASSS
NLTPAEFYPQSSYDYNYDYNGGVQ
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcggcggcagcagcagaacgggctatcatacgacaatctcttcaatctcgag
cctttgatgaactttcgattgccgaaacctagcgaggagtttgatacttatgggagtagc
agtcaggaggagagcacaagtagccaaggtcagggagcaatgacgggttacagtaacgga
agcatgactgataggtcttcaggccacacaaagaagcaaaagaggcgtgggtttgaactt
gagaccggtttaagcccttatggtaggagagatgcagatagtaatgatcaagatgatgaa
gattataacacaagaatctctgaagatcattaccgctcgatgcttagtgatcatgtacaa
aagtataggaaagttagggttcctgattcttcagttccaaatgtgagacgtaaccacagc
tcgaaggctgggaagtttacccatgagccatttgttaaagaggaagcaatgtttcgtgag
atggataactcgccagaatactttgatgctgattttgagtcggattatggtggagagaat
aagtatggttcccctctagattcttcctacttggacattggtgaggggataacgtatagg
atccctccaacttatgatctgcttgtgacttcactgaatttgccaagtttttcagacata
agaatagatgagtattttctgaagggaacactggatttaaggtctctagcagcatttgtt
gctagtgacaggaagtttgaggcccggaatcgaggagggttggcagagcctcagccacaa
tatgaatcacttcaagcacggctcaaggctctttctgctagcaactcaaatcagaagttt
tcactcaaagtgtgtgatgatcatctggactccattccggaaggagcgngtgaatctggt
aatttacaggtttactatgttagggtcatggaaaagggagatacatttgagattattgag
cgagccttgcctaagaagcagatagttaaaaaagatccttctgtgattgaaaaggaggaa
atggataagattgcgaaagtctgggtgaatattgtgaggagagatattcctaggcatcac
agggctctcactaatcttcacaagaaaaaaattggtgatgcgaagcgtttttcagaaacc
tgccaaagagaagtaaaactgaaagttggtaggtcaatcaagctgatgagaggtgcagcc
atccggaccagaaaacttgctagagacatgctgctgttctggaagagagtagataaagag
caggcagaagtgagaaagaaagaagaacgagaagctgctgaagcattgaagcgtgaagaa
gagcttcgagaagcaaagagacagcagcaaagactcaattttttgttatcacaaacagag
ctgtacagtcattttatgcagaacaagtcttcacaaccctcagaatctttgcccactgta
gacgatgaatccacaatcccagaagagccatctgcagctgcagtccaaccaggggaggaa
gaagaccctgaggaagctgaactaagaagagaagctctgaaagcagcccatcatgctgtc
tcacagcagaagaagataactaatttgtttgacagtgaatgtttgaagcttagacaagct
gctgaaactacagacgtgactgatgatccggcaatttcagggtccagtaatattgaccta
ttgaatccttcaacgatgcctgcaacctcatctgtgcaaacgccaacattgtttaaaggc
tctttgaaagagtatcagttgaaagggttgcaatggcttgtgaactgctatgagcagggt
ttgaatggcattcttgctgacgaaatgggccttgggaagactatccaggctatggcattc
ttagcgcatttggctgaggagaaaaacatatggggtccatttttggtggttgctccatca
tctgttctgaataattgggctgatgaaattagtcgattctgccctgatctaaagacactt
ccatattggggtggagcttctgaaaggcttgttctaaggaaaaatatcaacccaaagcgc
ctttatagaagggatgctggctttcatatacttattactagctaccagttgattattagt
gatgaaaagatcttaaagcgtgtgaaatggcagtatatggtattggatgaagcccaggcc
ataaaaagttcacagagtcagcgatggaggacattgctcacttttaactgtagaaatcga
ttgcttctaactggcacacctatacaaaataatatggctgagctctgggccctgcttcat
ttcatcatgcccactctgtttgatagccatgaacagtttaatgaatggttttctaaaggc
attgagagccatgcagaacatggaggcactttaaatgaacatcagcttaacagactgcat
gcaatcttgaaaccttttatgttgcggcgagttaagaaagatgtcataacagagatgaca
tcgaagaaggaggttacagttcattgtaaattaagttccaggcagcaggctttttatcaa
gctataaaaaacaaaatatcacttgctgagctttttgacagtaaccgtgggcacctaacg
gacaagaaactcgttaacttgatgaacattgtcattcaattgcggaaggtgtgcaatcat
ccagaattatttgagcgcaatgagggaagctcattcttatattttgcagatgtcccaaat
tctcttcctcctcctccatttggggagctggaagacgtttattactcgggagacttgaat
cccatatcgtataaggttccaaaattggtttatcaagaaactatccggaattttgaaagg
tcttgttcagtcatggggcatgatgtccagaataatacttttgagagactcttcagtatt
tattctcctgaaagtatatatcgctctgcagtttcccaattttcagatgaatattctctg
accactgggacatttggctttactcggcttatggatttatcaccagctgaggtctcattt
ttagcccagtgttctttgcttgaaaagctgatgttttctgtgaaaagatgggataagcag
tttgtagatgaagttgttgatctcttcatgaatttagagggtggtgatgctcaatatgat
cagctagaggaatcaaaggtgagaacagttgcacggatgctgattattcccacaaaatca
gaggctagtatgctaaggaaaaaacatgcaactggccctaatgatgctccatttgagccg
ttggtgatctcacataatgaaagatacatgtccaacatcagcatgttgcgttcatcatat
gcttttatcccaaaagccagagctccgcctataagtgctcagtgcatggatagaagcttt
gcataccaaactgttgaagaattgcatcatccttgggctaagaagatgtttcttgggttt
gctcgcacatctgagttcaatggtcctagaatgccaactgctcctcatcatctgatagaa
gaggtcaatacagaatcatcttatcagcccatgctcgagctgacacacaggatttttggt
tcttctccacctatgcaaagttttgaccctgctaaaatgctcacggattccgggaaactt
caaactttagacatactattgaaacgtcttcgagcagaaaaccatcgtgttcttttgttt
gcacaaatgacaaagatgttgaacattcttgaggactatatgaattataggaaatacaaa
tatttcagacttgatggatcatccagcattatggatcgtcgtgacatggttagagacttt
cagcagcggaatgacatttttgtattcttgttgagtactagagcaggaggtctcggtatc
aacctgacagctgctgacactgtcatcttctatgagagtgattggaacccaacattagat
ctacaagcaatggacagagcacatcggttaggtcaaacaaaagaggtcactgtatatcga
ctaatctgcaaggagacagttgaagagaagatcttgcaaagagcaagccagaaaaatact
gtgcaacagctggttatgacaggagggcatgtccagggggagattctaaagccagaggat
gttgtttcattgctccttgatgatgcccagctggagcaaaaattaagagaaatacctctg
caggttaaggacagacaaaagaagaaaaaaccaccaaaaggaatacgggttgatgctgat
ggggttgtgtcactggaagattttgataatcctgtacaacaagatgcagattacggagag
caacaaaatggatctgctgccaacaagaagagaaaattaagacctgacaaccaaactcca
aagccacgaagccattcaaaatccaagaataacaatacaggcatggagattgacgaagta
caaccaacagagtatgagaaggatgataacattgaacagagaccaacgagaccaaagaga
acaaagaagagtgttaacgagaaccttgaacctgcatataattctgctgccagctcatcc
aacctgacgcccgcagagttttacccgcaatcctcatacgattataactacgactacaat
ggtggagttcaataa
DBGET
integrated database retrieval system
