Asparagus officinalis (garden asparagus): 109848958
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Entry
109848958 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109848958
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848958
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109848958
Protein phosphatases and associated proteins [BR:
aof01009
]
HAD phosphatases
Fcp/Scp phosphatases
109848958
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109848958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
109848958
NCBI-ProteinID:
XP_020274285
LinkDB
All DBs
Position
7:34693591..34709163
Genome browser
AA seq
736 aa
AA seq
DB search
MANPNPNSNPPITIASAIYKLQLHLFNTPSTPFDLLIAASTLLSKPDYDDIVTERTISDL
FSXSDRRRKGRYRIALSEHKVYDLQEIYNYCCEECLIGSRAFKGSLGDERRADVDVRREK
VEDVLRLFGCFDGDEDEEEVRRGERLGKLKLEIKEKERAVDGDLKLGEWIGPPNAIEGYI
PHLDRGSNIPSKSETAQETGSASSTEVDHMTPSLRDECDGDPSKRSSAMINDVPETTAKK
LEDMIITEKKNTSKQSLESLKLKFQTNVAAHNIGKVDNGDMGFTSSIIVGNDFDAALSKS
CVVSTQDASELIAKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKNDKIDFQSTIITG
DLVNVTSGTSSTSSLDSSSKDSVNVHVKNKTEPLGYGESDDVMLSGGVSMEKKHVSQENE
LKSSLKTSRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDLDSSLRLASAEACAAALS
HAASAAASGDVDAGDAVSEAGIVILPQPQYCEDRESEADEEACEFDQGVLKWPTKTVLLD
TDVFEVEDSWHDTPPEGFSLTLSPFATMWMALFGWITCSSLCYIYGHDEISHEDFLFVNG
REYPRKTFLRDGKSSEIRLALDGFICRALPGLVMDLKLPTPVSTLEKFLARLLDTMSFVD
ALPSFRMKQWQVIVLLFIEALSVHRLPSLAPQMTSRNLLLHTVLNAARVSIEEYETMRDL
MMPLGRLPQFSMQSGG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccctaaccctaactccaatcccccaatcaccatcgcatccgccatctacaag
ctccagctccacctcttcaacaccccatcaacccccttcgacctcctcatcgccgcctcc
actctcctttcaaagcccgactacgacgacatcgtcaccgagcgcacaatctccgacctc
ttctctnngtccgaccgccggcggaagggtcgataccgcatcgcgctcagcgagcacaag
gtctacgatctccaagagatttacaattactgctgcgaggagtgcttgattgggagcagg
gcatttaaggggagcttgggtgatgagaggagggctgatgttgatgttaggagagagaag
gtcgaggatgttttgagattgtttgggtgttttgatggggatgaagatgaggaggaggtg
aggagaggtgagaggttggggaagttgaagctggagattaaggagaaggagagggctgtg
gacggtgatttgaagttgggtgagtggattgggccacccaatgcgatcgagggttatatt
cctcatcttgatcgaggttctaacattccatccaagtcagaaactgcacaagagacgggt
agtgctagcagcactgaagtggaccatatgactccaagtcttagagatgaatgtgatggt
gatccttcgaagcgttcttctgccatgataaatgatgttccagagacaactgcgaagaag
ttggaagatatgattattacagagaagaaaaatacaagcaaacagtcattggagtcatta
aagcttaaatttcaaacaaatgtggctgctcacaatattggcaaagtggataatggtgat
atgggtttcacaagtagtatcattgttggcaatgattttgatgcagctctttcaaaaagc
tgtgttgtttctacccaagatgcttcagaactaatagctaaacaattggaggaggttgtt
cttgctgagaagaaaaagaaaaaagttaaaaaatcaaaatcatcaagttccaatgcaaga
aaaattgcaagtggtaggaagaatgacaaaatagattttcagagcaccataatcactggg
gatttagttaatgttacttccgggacttcatctacatcatcccttgatagttcatctaaa
gattcggtaaatgttcatgtcaagaataagacagagccactaggctatggtgaatcagat
gatgtaatgttatctggaggagttagcatggaaaagaaacatgtatcgcaggaaaacgaa
ctgaaatcctctttgaagacttcaagatcaaaaggaggaaatcggtctgtcaaatgggct
gatgaggtaattcttgaagtgttggaagataaaaaggacacaccacaagtcatgcgggag
gaagatctagatagttccttaagacttgcatcagctgaagcttgtgctgctgcactatct
catgcagcaagcgctgctgcatcaggtgatgttgatgctggtgatgcagtctcggaagct
gggattgtaatattgccccaaccacagtactgtgaagaccgggagtccgaggcagatgag
gaagcatgtgaatttgatcagggggttctgaagtggcctacaaagacagtacttttagac
actgacgtgtttgaagttgaagactcttggcatgacacaccacctgagggttttagttta
actttatcaccatttgcgacaatgtggatggcactgtttggatggataacatgttcttct
ttatgctacatatatggacatgatgaaatttcacatgaagactttttgtttgtgaatggg
agggaatacccacgaaaaactttccttagagatggaaaatcatctgaaatcaggctagct
ctagatggtttcatatgccgcgcattgcctgggcttgttatggatctaaaattgccaaca
ccagtctcaacactggagaaatttttggctcgcttgctcgacacaatgtcatttgtagat
gcactaccgtccttcagaatgaagcaatggcaagtgattgttcttttgtttattgaagcc
ctttctgtgcatagacttccttctcttgctcctcagatgacaagcagaaatttgctgcta
cacacggttctgaatgccgctcgggtgagcattgaagagtatgaaaccatgagagatctt
atgatgccactaggccgcttgcctcaattctctatgcagagtggtggttaa
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