Asparagus officinalis (garden asparagus): 109848994
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Entry
109848994 CDS
T05243
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109848994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109848994
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109848994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
DUF2779
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
109848994
NCBI-ProteinID:
XP_020274344
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All DBs
Position
7:127189418..127195674
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AA seq
372 aa
AA seq
DB search
MTMETSSSNSAPNFSPESTKLFVGEIDGSFKEEEIKDYFTKFGEVKEVVVVKDRVTGNVR
GFGFVEFLDPDSVEKALKEKEHAIGERRVDVKRARPRGEQRRNYQSPRYQYSLHSEHENS
GLNNNAANSYYTNENPAKLKKIFVGGLSSNITDDEFKTYFEKFGKIVDAVIMYDSSTQRP
RGFGFITFDSVEAVDTVLQKKFHMLNNKNVEVKLAVPKGSNNQTNFSDSDGNLDGGRGFA
GNSHQRDYYPSYTPKYGFYPGYAPPPVPGFFYGAAGYGGGYLPYGGISYGAPYGRIPWNG
QVMMGARRSPVPYGYANVGFGGYTGMANVGYNGYTLSSNDKSNLTDDDVRITDHSSGTEE
VGSEKLENQQVS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggagacttcctcatcgaattctgcgcccaatttctcgccggagtcgacgaag
ttgttcgttggagagattgacgggagctttaaggaggaggagattaaggattacttcacc
aagtttggggaagtgaaggaggttgttgtggtcaaggatagggtcactggtaacgttaga
ggctttgggttcgttgagtttttggacccggattcggtcgaaaaggctctcaaggagaag
gagcatgctattggcgagcgcagggtagacgtgaaaagagccagaccaagaggtgaacaa
cgccggaattaccaatccccccggtaccaatactcactccatagcgagcatgaaaatagt
gggttaaacaacaatgctgctaacagttactataccaacgaaaatcctgccaagttaaag
aagatttttgtaggtggcctctcctctaacattacagatgatgagttcaagacctacttc
gagaagtttggcaagatagttgatgctgtgattatgtacgatagttctactcaacggcca
agaggctttggtttcattacttttgattcagtggaggctgtagatactgtgctgcagaag
aagttccacatgttgaacaataagaatgtggaggtaaaacttgcagtgcccaagggcagc
aataaccaaaccaactttagtgactccgatggtaatttggatggtgggagagggtttgct
ggtaatagtcaccaaagagattattatccatcttacacccctaaatatgggttttatccg
ggatatgcaccaccgcctgttccaggttttttttatggagcagctggatacggtggtgga
tatttaccttatggtggaataagttatggtgcaccatatggaagaatcccttggaatggg
caagtaatgatgggtgcgaggaggagtcccgttccttatggctacgctaatgtaggtttt
ggtggatataccggcatggctaatgttggatataatggctatacattgtccagtaatgat
aagtcgaacttaactgacgatgatgttaggataacagatcattctagtggaacagaggag
gttggaagtgaaaagttggaaaatcaacaagtctcctga
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