Asparagus officinalis (garden asparagus): 109849043
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Entry
109849043 CDS
T05243
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109849043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109849043
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109849043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_14
AAA_2
AAA_33
RNA_helicase
TIP49
AAA_28
Viral_helicase1
nSTAND3
NPHP3_N
Bac_DnaA
Rad17
AAA_17
AAA_18
TsaE
AAA_3
Mg_chelatase
IstB_IS21
AAA_11
NB-ARC
Vps4_C
NACHT
Cytidylate_kin2
Zeta_toxin
AAA_19
Nucleolin_bd
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
109849043
NCBI-ProteinID:
XP_020274402
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All DBs
Position
1:9960598..9972367
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AA seq
789 aa
AA seq
DB search
MGKRMRRGGRSPASSYSVLNREELRDHIVAAKLDSSFDVTAVVNHLRSDYPHYSRIKVQP
FTRLVQETLDFLHQTQKSSSSNDDDEVNRSTKCRNPNPRRTDESERRLLRAEAEHVRKQK
RKIHQADPSDASTAGSTSTYESDDDDAIFEAKVDPEFDLMKSMLRDNYGKKSKPQKEDEN
LEIEASAGKKRMVIGENLAKVESSMKGGVIRREGTRFEDLGGMKDVLDELQMEVLVPLVH
PELLKRLGVRPVAGILLHGPPGCGKTRLAEAIANEAGVPFQKISAPEFISGVSGASEETI
RDRFKEAYRTAPSIIFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHHTQSCDDSQT
ETSEKKPGYVLVIGATNRPDALDQALRRPGRFDREISLGVPDENARLEILSVLTRKCNLE
GEFNLMKIARATPGFVGADLNALVNKAGNLAMRRIMEKRKSGFQEGKTDDWLRQPLSPEE
LASINVTMSDFEEATKMVQPSLRREGFSSIPNTKWEDVGGLNSLRKEFDRHIVQRIKNPE
DYEELGLNLEVGFLLHGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT
VFSRARTCSPCILFFDEVDALTTMRGKDGNFGDRLLNQLLIELDGADQRRGVYVIGATNR
LEVMDPAVLRPGRFGTILYVPLPSIEERGLILKALARKKPVAIDVDLDALGRCEACHNFS
GADLSALMNEAAMAALEEKQMTLEDSSSFTRPLVIETSHFEKALVKVGPSVSEKQRIYYE
ALSRSHRSA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagaatgagacgcggcggccgatcgccagcgtcatcctactccgtcctcaac
cgcgaggaactccgcgatcacatcgtcgccgcgaagctcgactcctccttcgacgtcacc
gccgtcgtcaatcacctccgctccgattatccccactactcccgcattaaggtccagcct
ttcacacgcctcgtccaggaaaccctagatttccttcaccaaacccaaaaatcatcttcc
tccaatgacgacgatgaggtcaaccgaagcactaaatgtaggaaccctaaccctaggagg
accgatgagtcggagaggagattgcttcgcgctgaggctgagcatgtacggaaacagaag
cgcaagatccaccaagctgatccatctgatgcctcgacggcaggctcgacctcgacctat
gaatctgatgacgacgatgccatattcgaggcgaaggtcgatccagaatttgacctaatg
aagtccatgctgagggataactatggcaagaagtcaaaaccgcagaaagaggatgaaaac
ctagaaattgaagcttctgctgggaagaagaggatggttataggtgaaaatttagcaaag
gtggagtcttcgatgaagggaggggtaataagaagggaaggaactaggtttgaggatctt
ggcgggatgaaggatgttttggacgagttgcagatggaggtgctcgtgccgcttgttcat
ccggagctgttgaagagactaggagtccgtccggttgccggaattttgctgcacgggccg
ccaggttgtgggaagacgaggcttgcggaggccattgcaaatgaggctggtgtccccttt
cagaaaatctctgctcctgaattcatttcgggtgtctctggtgcttctgaagaaactata
agagaccgtttcaaagaggcatacagaactgctccatcaatcatattcattgatgagata
gatgcaattgcttccaagcgagaaaacctgcaaagggagatggaacggcggatagtaaca
cagcttatgacttgcatggatgaatcacatcacactcagtcatgtgatgattcccagaca
gaaacatctgagaagaagcctggttatgttcttgtaatcggagcaacaaacagaccagat
gcacttgaccaagctttgaggagacctggacggtttgatcgtgagatttctctgggtgta
cctgatgaaaatgcacggctagagatcctgtcagttcttactcggaaatgcaatcttgag
ggtgaattcaatcttatgaagatagcaagggctactccaggttttgtgggagctgatttg
aacgcactggtgaacaaagctggcaatctggcaatgagaagaataatggagaagaggaaa
tctggatttcaagagggaaaaacagatgactggttgcggcaaccattgtcccctgaagaa
ctagcgagcattaatgttacaatgtctgattttgaggaagccactaaaatggttcaaccc
tctttaagacgtgaaggattttcctcaatacctaacaccaagtgggaggatgttggtggt
ctcaactctttgaggaaagagtttgatcgccatattgttcaacgcataaagaaccctgag
gattatgaggaacttggtttgaacctggaggttggcttcttgcttcatggacctcctggt
tgtggtaaaacattgattgccaaggctgttgcaaatgaggcaggcgccaatttcatacac
atcaagggtcctgaacttctgaataaatatgttggagaaagtgagctggcagttagaaca
gtatttagccgtgctagaacatgctccccttgcatacttttctttgatgaggtggatgct
ttgacaactatgcgaggaaaagatggaaactttggggatcggctcctcaaccagctactc
atagagctagatggtgcagatcagaggagaggcgtctatgtcattggagctacaaacaga
ctggaggttatggatcctgctgtcttacgaccagggagatttggtacaattctttatgtt
cctttacctagcattgaagagcgtggattgatcctcaaagcacttgctcgtaagaagcct
gttgctattgatgtggatttggatgcgttgggacgttgcgaggcatgccataatttctct
ggtgctgatctttcggccttgatgaatgaagctgccatggctgctttggaagagaaacaa
atgactttggaggacagcagttcatttactagaccgttagtaattgagacatcacatttt
gagaaagctctggtgaaggttggtccgtctgtttcagaaaagcaaaggatttactatgag
gccttgtcaaggagccatagatcagcttga
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