KEGG   Asparagus officinalis (garden asparagus): 109849065
Entry
109849065         CDS       T05243                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109849065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aof03000]
    109849065
   03021 Transcription machinery [BR:aof03021]
    109849065
Transcription factors [BR:aof03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109849065
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109849065
  RNA polymerase III system
    TFIIIB
     109849065
  RNA polymerase I system
    SL1/TIF-1B
     109849065
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 109849065
NCBI-ProteinID: XP_020274431
LinkDB
Position
7:137448561..137453169
AA seq 200 aa
MADQVLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPASFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYAAFENIYPVLTEFRKSQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcagatcaagtgttggaagggaatcagcctgtagatctttcaaagcatccatcaggg
atcgttccaactcttcagaatattgtttcaactgtaaatctggactgcaagttggatctg
aaatccattgctctacaggctcgtaatgcagaatacaatcccaagcgttttgctgcagtt
atcatgagaataagagaaccgaagacgacagcgctgatttttgcatcagggaaaatggtc
tgtacgggagcgaagagtgagcaacaatcaaaactcgcagctcggaagtatgctcgtatc
attcaaaagctcgggttccctgcgtcgtttaaggatttcaagatccaaaatattgttggc
tcatgtgatgtcaaatttcctataagactggagggtcttgcatactcccatggtgctttc
tcaagttatgaaccagaactcttccctggccttatctatcgcatgaagcagccaaagatt
gttcttctcatatttgtttcaggcaaaatcgtccttacaggagctaaggtaagagatgag
acctatgctgcgtttgagaatatatatccagtgctcacggaattcaggaaaagtcagcag
tga

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