Asparagus officinalis (garden asparagus): 109849102
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Entry
109849102 CDS
T05243
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aof04812
]
109849102
Cytoskeleton proteins [BR:
aof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109849102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
eIF2A
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
VPS8_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
109849102
NCBI-ProteinID:
XP_020274486
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Position
7:73743050..73756600
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AA seq
774 aa
AA seq
DB search
MATTKRAYKLQEFVAHSSNVNCLKIGRRTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHT
SAIESVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETTGVRSMTFNPDG
RTLLCGLHESLKVFSWEPVRCHDAVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDIS
RIEPYAVPSIGRSNSRSESKSTSSTLSLQADNSIKAGIGRLSVSQNPDTGAKEAKSTAST
GSAPNTPQRTGPKVTAVNPAAQPGNTVLKRNSSKYHGTANPPSFNKSDVVPVIVPRTNTR
MEMASDSRRDVTAGRTIPYNVHSKLSDLRKLSNASDLDRSSISGQSGFLGNKNTEQNEDM
EPNFVSATNGVNRSRIVAERNLEEVRPVGSAKMGVGQLTESSTNCQQENYDGRVLKPRHF
SSLEVSKGGRTRSIVANWERNEQPPSFECMTPNNSSEINHNTKISYTRERVSSAEKETVS
ASDEDTISDLLEHHNQFIISAQSRLTKLQVVQRLWERKDIRGLISALEKMSDHAVSADVV
SVLIDKSDIVTLDICTILLPLLTSLLGSDMDRHLTVSMEMLLKLVRVFGPVIHSTVSGPP
LVGVDLEAENRLERCNLCFIELEKIKHVIPSLTRRGGSIAKSTQELKLALQEFF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctactacaaagcgcgcgtacaagctacaggaatttgtagcgcattcttcgaatgtg
aactgtcttaagattgggaggaggacttctagggttcttgttactggaggtgaagatcac
aaggtcaatctttgggctataggcaagcctaacgcaatattgagtttatctggacatacg
agcgcaattgagtcagtaagttttgattcctcggaggtattagtggccgcaggagcagct
agtgggacaatcaaattgtgggatttagaggaggcaaagattgttcgcactctcacaggt
cataggtcaaattgtatctctgttgacttccatccatttggagagttctttgcttctggg
tcattggatacaaatctcaagatatgggatatcagaagaaagggatgcattcatacgtat
aaggggcatacacgaggagttaatgccattagatttacgccagatggtcggtgggttgtt
tctggtggagaagacaatactgtcaagctatgggatctgactgctgggaagctcttgcat
gatttcaagtgccatgaaggacaggttcagtgtatagattttcatccccatgagtttctg
ttggcaacaggttcagctgacaaaacagttaaattttgggatcttgaaacttttgagttg
attggttctgcaggacctgagacaacaggggtacgctcgatgaccttcaaccctgatggt
agaacccttctttgtgggttgcatgaaagtctgaaggttttctcttgggagccagtaagg
tgccatgatgcagtggatgtgggatggtctagactgtcagatctgaacatccatgagggg
aaacttctggggtgctcttacaatcaaagttgtgttggagtatgggttgttgacatctcg
cggattgagccttatgctgttccaagtattggacgatcaaatagtcgttcagaatcaaaa
tccacaagtagtactttgtctctgcaagctgacaacagcataaaagctggtattgggagg
ttatcagtttcacaaaatccagatactggagctaaggaggcaaaatctacagcatctact
ggcagtgcccccaatacccctcaaagaactggcccaaaagtgactgcagtaaatccagca
gcacagcctggcaatacagtcctaaaaagaaattcatcaaaatatcatggaacagccaat
cctccatctttcaacaagtctgatgtggtacctgtaattgtacccagaactaacacaaga
atggaaatggcctctgattctagaagggacgtcactgctggaagaacaataccgtataat
gtccactcaaagttatctgatctccgtaagttgtcgaatgcgagtgatttagatagatca
agcatttctggtcaatcgggattcttgggcaataagaacacagaacaaaatgaagatatg
gagccaaattttgtttctgctaccaatggtgttaatcggtcaaggattgttgctgaaagg
aacctagaagaagttagacccgtcggatcagcaaagatgggagttggtcaactgacagaa
tcaagtacaaattgccaacaagaaaattatgatggtcgagtgcttaagcccagacatttc
tcttcattagaagtttcgaaaggagggagaacaagatcaattgttgcaaactgggaaagg
aacgaacaaccaccaagctttgagtgcatgacacccaacaactcttctgagatcaatcac
aatactaaaatctcatatacaagagagcgtgtttcgtctgctgagaaagaaacagtttcc
gccagtgatgaggacactatttctgatttactggaacatcacaatcagttcataatttca
gcacagtctcgcttgacaaaattacaggttgttcagcggttatgggaaaggaaagatata
aggggtctcatcagtgcgttggaaaagatgtcggatcatgctgtctctgctgatgttgtc
agcgttttaattgataaaagtgatattgtaacactggacatatgcactattcttctgccc
cttctcacaagccttctagggagtgatatggataggcacttgactgtttctatggagatg
ctgttgaagctggtgagggtttttggtcctgttatccattcaactgtatcaggacctcca
ttggttggggttgaccttgaagctgagaatcggcttgagcgttgtaacttgtgctttatt
gagttggaaaagatcaagcacgttatcccatctctcacaaggagaggagggtctatagca
aagtctacgcaagagttaaagcttgcccttcaagaatttttttga
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