KEGG   Asparagus officinalis (garden asparagus): 109849286
Entry
109849286         CDS       T05243                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aof04131]
    109849286
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aof04147]
    109849286
Membrane trafficking [BR:aof04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    109849286
Exosome [BR:aof04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109849286
  Exosomal proteins of bladder cancer cells
   109849286
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Fis1_TPR_C Beta-prop_ACSF4 PAPS_reduct Beta-prop_At4g14310 Zn_ribbon_19
Other DBs
NCBI-GeneID: 109849286
NCBI-ProteinID: XP_020274684
LinkDB
Position
7:complement(144500880..144507921)
AA seq 1222 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHDEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDVLYYVKDRFLRFFEFSSQKDNQVVPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDAEGGSYELHVIPRDTSGRGDFLQDAKKGSGASAVF
VARNRFAVLDRSSNQVLVKNLKNEIVKKSALPIATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIVLGELQTPSVKYVVWSGDMESVALLSKHAIVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYLTKVSGGTLFCLDRDGKNRIISIDATEYI
FKLALLRKRYDHVMSMIRNSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGIEALRQGNTSIVEYAYQRTKNFERLSFLYLVTGNKDKLSK
MLRIAEMKNDIMGQFHNAMYLGDVEERVKILENAGHLPLAYVTASTHGLTETADRLAAEL
EQKGIVPSIPEGKTRSLLMPPAPLMCSGDWPLLRVMRGVFEGGLDTVGRGAGHDEDEEEA
VADWGDEDLDIVDVDVDGVKRDGDVISEVEDIEAHGENDEGGWDLEDLELPPDVDIPQSA
NISRTSVFVAPTPGMPVGQIWIQKSSFAAEHVAAGNFDTAMRLLNRQLGIKNFDPLKSLF
KDIHMGSHTYLDAFPSAPKISIAVEKGWSESASPNVRGPPALVFKFSQMDDMLKAAYRAT
TEGKFPEALRLFLSILHTIPLIVVDSRREVDEVKELIEIAKEYVLGLKIEVKRKEIKDNV
VRQQELAAYFTNCKLQKVHTRLALMSAMTVCYRGGSYTTAANFARMLLEHNPPESQAEKV
RKVLAACGDKRDTRQLNYDFRNPFVVCGSSFVPIYRGQKDISCPYCGARFVPDIEGQICT
VCELAVVGADASGLLCSPSQRR
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgctgacgaaattcgagacgaagagcaaccgagtgaaagggctgagctttcacagtaag
cggccatggatcctcgcaagtctccacagtggcgtgatccagctgtgggattatcgcatg
ggaactctgatcgatcggttcgatgagcacgatggccccgttcgcggcgtccattttcat
aaatctcaacctctcttcgtctctggaggtgatgactacaagattaaggtgtggaattac
aaaacacataggtgcctatttacccttctcgggcaccttgattatatccgtacagtccag
ttccatgatgagtacccttggattgttagtgctagtgatgaccagacaataagaatttgg
aactggcaatctcgcacttgtatttcagtgctgacagggcataatcattacgtcatgtgt
gcatctttccaccctaaggaggaccttgttgtttcagcttcactggatcagactgttcgt
gtttgggatattggggcattgagaaagaaaaccgtctctcctgcagatgatatcttgcgt
ctgagccagatgaatacagacttatttggtggagttgatgctgttgtgaagtatgtcctt
gaaggtcatgaccgaggagttaactgggcatctttccatcccagtcttcctcttattgtt
tctggggcagatgatcgacaagtgaagctatggcggatgaatgatacaaaggcttgggaa
gtggatacattgagaggtcatatgaataatgtttcttgtgtgatgtttcatgcgaagcag
gacattattgtgtccaactctgaagacaaaagcattcgaatatgggatgccacgaagcgc
actggaattcagactttccgtcgtgaacatgaccgtttctggatccttgcagcccatcca
gaaatgaatcttcttgcagctggtcatgatagtggtatgattgttttcaaactagagaga
gaacgtcctgctttctctgtaagtggcgatgttctttattatgtcaaagatcggttcttg
cggttcttcgagttttcatctcaaaaggataatcaagtggttccaataagaagacctggt
tctgtaagcttgaatcagtcacccaggacactatcctatagtcccacagagaatgctgta
ttgatttgctctgatgctgagggtggatcatatgaactccatgtgattcccagggataca
agtggaagaggtgatttcctgcaggatgcaaagaaaggatcaggggcttcagctgttttt
gtagctcgtaacaggtttgcagtgcttgacaggagcagtaatcaagtactggtaaagaat
ctcaaaaatgagattgtgaagaagagtgctctccctattgctactgatgccatattctat
gctgggactggaaacttattgtgccgggctgaggacagggtggtcatctttgatctgcag
cagaggattgttcttggagagcttcagactccttctgtgaagtatgtagtctggtctggt
gacatggagagtgttgctttactcagcaagcatgctatagttatagctaacaagaaactc
gtacatcgatgcacacttcatgagaccattcgtgtgaaaagtggtgcatgggatgaaaat
ggtgtcttcatctatacaactttgaaccacatcaagtattgcctccccaatggtgacagt
ggaattattagaacccttgatgtcccaatatatctcaccaaggtctctgggggtactctc
ttttgcttggatcgtgatgggaagaatcgcataatatctattgatgctaccgagtatata
ttcaagcttgccctgctaaggaagagatatgaccatgtaatgagtatgattaggaattca
cagctttgtggacaggcagtgattgcttatctccaacaaaaaggcttccctgaagttgca
ttgcattttgtcaaagatgagagaacccgattcaacctagctcttgagagtggtaatatc
cagattgctgtagcttctgcaaaggaaattgatgagaaggaccactggtacaggttaggc
attgaggctcttcgacaaggaaatactagtattgtggagtatgcctaccagagaaccaag
aactttgagaggttgtctttcctatatcttgtaacggggaacaaggataagctatccaaa
atgctgaggatcgccgagatgaagaatgacattatgggtcagttccacaatgccatgtat
cttggtgatgtcgaagaacgtgtcaagattttggagaacgctggtcatttgcctctagcc
tatgttactgcttccactcacgggttgacagaaactgctgataggctggctgctgagttg
gagcaaaaaggtatagttccctccattcccgaagggaaaacacgctctcttctgatgcct
cctgcacccctaatgtgcagtggggattggccgttgttgagagtcatgagaggggttttt
gaaggaggattggatactgtaggaaggggggcaggtcatgatgaggatgaagaagaagct
gtcgctgattggggtgatgaagacttggatattgtcgatgtcgatgtcgatggtgttaaa
cgagatggagatgtgatctcagaagtcgaggacatcgaagcacatggagagaatgatgaa
ggaggatgggatctcgaagatttagagcttccacctgatgtagatattccacagtctgcc
aatatttctcgtacttctgtatttgttgctcctacacctggaatgcctgttggccaaatt
tggatacagaagtcctcttttgctgcagagcatgtggctgctggaaacttcgatactgca
atgcgacttcttaaccggcaattaggcatcaaaaatttcgaccccttgaaatctttgttt
aaagacatacacatggggagtcacacttatcttgatgcttttccttcagccccaaagata
tccattgctgttgaaaaaggatggagtgagtctgcaagtcccaatgtgaggggaccacct
gcgctcgtgttcaaattctcgcaaatggatgatatgcttaaggcagcttatcgagccaca
acagagggaaaatttcctgaggccttgcggctgttccttagcattttacacaccatccct
cttatcgtggtagactctagaagagaggttgatgaagtcaaagagctgattgaaattgct
aaagagtatgttttgggcttgaaaattgaggtcaagaggaaggaaatcaaggacaatgtc
gttcgacaacaggaactagcagcatacttcactaactgcaagcttcaaaaggttcacaca
aggctcgcgctcatgagtgctatgactgtatgctatagaggagggagctacactacagca
gccaatttcgctagaatgcttcttgagcacaacccacctgagtcgcaagcagaaaaagtg
aggaaagtgttagcagcttgtggcgataagagagacactagacagttgaactatgatttc
aggaatccctttgttgtttgtggatcatcttttgttcctatttatcgagggcagaaggat
atctcatgcccttactgtggtgctcgatttgtgccagatattgaaggccaaatatgcaca
gtttgtgaacttgcagtggtaggagctgatgcttctggtttgctgtgctctccttcacaa
aggagataa

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