Asparagus officinalis (garden asparagus): 109849288
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Entry
109849288 CDS
T05243
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109849288
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109849288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Vps41
EIF3I
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
PALB2_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
109849288
NCBI-ProteinID:
XP_020274687
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All DBs
Position
7:complement(58001947..58010170)
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AA seq
469 aa
AA seq
DB search
MVRSLKNIQKIKRKNKGSKTKKGESSSIPSAPAQVWQPGVDKLEEGEELQFDPSAYNYLR
AFSIGWPCLSFDIVRDSLGLVRSEFPHTVYGVAGTQAEQASWNHIGVFKLSSISGKKREV
LPSKSADNETDIDSDSSSDEDEDEADESTQPILQLHKVAHQGCINRIRSMTQKPHICATW
GDTGHVQVWNFTSILNALAESETDASRGGNSIHHQAPIMNFGGHKDEGYAIDWSLVVPGR
LVTGDCRNCIHLWEPSSETWNVDKNPFVGHTASVEDLQWSPTEADVFASCSVDGNIAIWD
TRLGKSPAVSIKAHNADVNVISWNQLASCMLASGSDDGTFSIRDLRLIKGDSLVAHFEYH
KQPITSIEWSPHEASTLAVSSADNQLTIWDLSLERDEEEEAEFKAKIKEQANAPQDLPPQ
LLFVHQGQKDLKEIHWHQQIPGMLVSTAADGFNVLMPANIETTIPGAAS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagcctcaagaacatacagaaaatcaaaagaaagaacaagggatcaaagacg
aagaagggagaatcatcatcgatcccctccgcccctgcgcaggtgtggcaacctggagtt
gataagttggaagagggagaagagctccaatttgatccctctgcttataattatctgcgg
gctttcagcattggatggccctgtttgagttttgatattgttcgtgattcattgggattg
gtacgttcggagtttcctcatacagtttatggtgtcgcggggactcaggccgagcaagca
tcctggaatcatattggtgttttcaagctctccagtatatctgggaaaaagcgtgaggtg
ttgccttctaaatctgctgacaatgagactgatattgacagtgacagcagtagcgatgaa
gacgaggatgaggccgacgagtctacacaacctattttacagttgcataaagtggcacat
caaggatgtataaatcggatacgctccatgactcaaaagcctcatatatgtgcaacgtgg
ggcgatactgggcacgttcaggtgtggaactttacctccatcctaaatgctttagcagag
tctgaaacagatgccagcaggggaggtaatagcatacaccatcaagctccaataatgaat
tttggtgggcacaaagatgaaggctatgcaatagattggagtctagttgttcctggaagg
cttgttactggtgattgcaggaattgtattcacctttgggaaccttcttctgaaacatgg
aatgtggataaaaatccttttgttgggcatactgctagtgttgaagatctacaatggagt
cctacagaagcagacgtgtttgcctcgtgttctgtggatggaaatattgctatatgggat
acccgtctagggaaatcaccagccgtgtctataaaggcacacaatgctgatgttaatgtt
atctcatggaatcagctagcaagctgtatgttagcatcaggaagtgacgatggcacattt
tctatacgagatcttcgattgatcaagggagattccttggttgcacacttcgagtaccat
aagcaacctattacatcaatagaatggagcccacatgaagcatccactttggctgtctca
tctgcagataatcagttgacaatatgggacctctcattggaaagagatgaggaagaagag
gctgaatttaaagcaaagataaaagaacaagcaaatgccccacaagatctaccacctcag
ctccttttcgttcatcagggccagaaagatttgaaggaaatacactggcaccagcagatc
ccagggatgttggtatccacagctgccgatggcttcaatgttctcatgcctgcaaatata
gagactactattccaggagctgcatcgtga
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