Asparagus officinalis (garden asparagus): 109849306
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Entry
109849306 CDS
T05243
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109849306
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109849306
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GFIT
Motif
Pfam:
Glyco_hydro_28
K_trans
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109849306
NCBI-ProteinID:
XP_020274704
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Position
7:complement(47708791..47712907)
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AA seq
264 aa
AA seq
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MDPSKFLILSILTLLTHNCSCQSVPSHIEEGHRVVSVDDHFAKGDGATDDSKAFKKAWKE
TCSSSVSAVLVVPKRRRYLLEQLNFTGPCKSPVTFLIKGTLAAPLNRSEWNDKNRRLWIV
FDSVRNLVVEGGGTINGNGHIWWQNSCKRNKTLPCIGAPMALTFVSCNYLRVKNLRIKDS
QQFHVVVKDSREVKLSKLFIHAPEKSPNTDGIHLDHASNVVIRNCEIRTESVRWPVLAIA
ILAVVVGSQSIISGTFSIKSICSL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccaagtttctaattctgtcaatcctcactctcctcacccataactgctct
tgccaaagcgttccaagccacattgaagaaggccatagagttgtgagtgtggatgatcac
ttcgccaaaggcgatggagctaccgatgatagcaaggcatttaaaaaagcctggaaagaa
acctgctcatcttcagtatcagctgtgcttgtggtgcccaagagaaggagatatttgctt
gagcaactcaacttcactggcccttgcaagtctcctgtcacatttctgattaagggaacc
ctcgctgctcctttgaatcgatccgaatggaacgataagaacagaaggctatggatcgta
tttgatagcgtgaggaaccttgtcgtcgaaggaggaggtaccatcaatggcaatgggcat
atttggtggcaaaactcttgcaagagaaataaaactctgccctgcatcggcgctccaatg
gcattgacctttgtttcatgcaattacttgagggtgaagaacctaagaataaaagatagc
caacaatttcatgtagtagtaaaagatagtagggaagttaaactctcaaagctcttcatc
catgcaccagaaaagagtccaaacacagatgggattcatttggatcatgccagtaatgtt
gtcataagaaactgcgaaatcaggacagaaagtgtgagatggcctgttcttgctatagca
atactagctgtagtggtgggaagccaatcaatcatcagcgggacattctccatcaaatcc
atttgttctttgtaa
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