Asparagus officinalis (garden asparagus): 109849317
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Entry
109849317 CDS
T05243
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109849317
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109849317
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109849317
03019 Messenger RNA biogenesis [BR:
aof03019
]
109849317
03041 Spliceosome [BR:
aof03041
]
109849317
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109849317
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
109849317
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109849317
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109849317
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109849317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
109849317
NCBI-ProteinID:
XP_020274719
LinkDB
All DBs
Position
7:complement(45746331..45752595)
Genome browser
AA seq
319 aa
AA seq
DB search
MDETDVDDIIKRLVEGKGKQVQLSESEIRHLCVASKRVFLSQPNLLHVQAPVKVCGDLHG
QYIDLLRIFERGGFPPNAKYLFLGDYVDRGKRSLETICLLLAYKIKYPDKLFLLRGNHED
AKINRVYGFYDECKRRFNVRLWKIFTDCFNCLPVVALIDHKVLCMHGGLSPELNNLEQIN
EIERPTEVPDGGLLCDLLWSDPDSKIEGWGLSDRGVSCTFGADKLVEFLDENDIDLLCRA
HQVVEDGYEFFADKRLVTIFSAPNYCGEFDNVGALLTVDESLLCSFEIIKPLEKKVVGEG
STQTSRSTVTSKSSKFGSG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccgacgtcgacgatataataaagagattggtggaggggaaagggaagcag
gttcagctctctgagtccgagatccgccacctttgcgtcgcctcaaaaagagttttcctc
tctcagcctaatctccttcatgttcaggctcccgtcaaagtttgtggcgatctacatgga
caatacatcgaccttctaaggatttttgaacgtggtggattccctcctaatgcaaaatac
ctatttcttggtgattatgttgatcgtggcaagcgaagcttagaaacaatatgcttgctt
cttgcatacaaaataaagtaccctgataagcttttcctcttaagaggcaaccatgaggat
gcaaaaatcaatagagtctatggtttctatgacgaatgcaagcgaagattcaacgttcgt
ctatggaaaatattcacagattgctttaattgtttgcctgttgttgcgcttatcgatcac
aaggttctttgtatgcatgggggcctttcgccagaattgaataacttggagcagataaat
gaaattgagaggcctactgaggttcctgatggtggtcttctctgtgatttactctggtct
gatcctgattctaagattgaaggatgggggttgagcgatagaggggtttcttgtactttt
ggagctgataagcttgtggagttcttggatgagaatgatatcgatcttctttgtcgagct
catcaggtggtggaggatggatatgagttttttgcagacaagagactcgttacaattttc
tcagctccaaattattgcggagagtttgataatgttggtgccttattgactgttgacgag
tctcttttatgctcatttgagatcataaaacctcttgaaaagaaagttgtaggtgaagga
agcacacaaacatcaagatctactgtaactagtaagtcctctaagttcggaagtggctga
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integrated database retrieval system
