Asparagus officinalis (garden asparagus): 109849372
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Entry
109849372 CDS
T05243
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109849372
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109849372
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Furin-like_2
Motif
Other DBs
NCBI-GeneID:
109849372
NCBI-ProteinID:
XP_020274782
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Position
7:complement(140610774..140612767)
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AA seq
400 aa
AA seq
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MLIRSILTTILLWFATVTCFQAFYGVQARKNLDVDNSNELQDCHTGNVIDDCWRCYNSTW
YENRKRLASCTKGFGKKANGGKTGQFYTVTDDTDDPMNPKFGTLRYGVIQEHPLWIIFER
SMTINLKTELIIHNDKTIDGRGASVHVTGYGCITLQYVSHVIIHGVHVHDCKPSPPGYVA
VRPGVKIRRGGSDGDGIKLFGARNVWIDHCSFWSCSDGLIDVIMNSTHVTISNNHFKEHD
KVMLLGYNDDDAIEEKILRVTLAYNHFGKNLVQRMPRCRHGRFHIVNNYYSKWENYAIGG
TANPWILSQSNVFVAPDKPFNKEVTSRIHAQDWTNWNWLSHGDELKNGAKFTQSGKSDIE
FYKPMISMKARSSAEVVKMTADAGVLKCEIGMACVRKTSE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttaatacgttcaatcctcaccaccatcttgctgtggtttgctaccgtcacttgtttt
caagcattttatggagttcaagcacgaaaaaatttagacgtcgataactctaatgaactc
caagactgtcacacgggaaatgtcatcgacgactgttggagatgctacaactcaacatgg
tatgaaaatcgtaaaagacttgcaagttgcacaaaagggttcggcaaaaaagctaacggc
ggtaaaactggtcaattttacacagtcacagacgacactgacgatccgatgaaccccaaa
tttggcactctccgttacggagtaattcaagaacaccctctgtggatcatattcgaacga
agcatgaccattaacctcaaaacagagctcatcatccacaacgacaagaccatcgacgga
aggggagccagtgtgcatgtcacggggtatggatgcatcaccttacagtatgtcagtcat
gtcatcatccatggcgtccatgtacatgattgcaagccatcaccgccgggatacgtggca
gttcgaccgggagttaagattcgtagaggagggtctgatggggatgggattaagttgttc
ggtgctagaaatgtttggattgatcattgttctttttggagttgtagtgatgggcttatt
gatgttattatgaattctactcatgtcaccatctcaaataatcacttcaaagaacatgac
aaggtgatgcttttgggctataatgatgacgatgcaattgaagaaaaaattctaagagtg
acacttgcatataatcacttcggaaagaacttggtccagcgaatgccaagatgccgacat
ggacgatttcacatcgtaaacaattactacagtaaatgggaaaattacgccattggaggc
acagcaaatccttggattcttagccagagtaacgtatttgttgctcctgacaaacctttt
aacaaagaggttacaagtagaatacacgcacaagattggaccaattggaattggctatcg
catggagatgagctaaaaaatggtgcaaaatttacacaatcagggaaaagtgatatagag
ttctataagcctatgattagtatgaaggctagatcttcagctgaggtggtgaaaatgact
gcagatgctggtgttctcaagtgtgagatagggatggcctgtgttcgtaagacgagtgag
taa
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