Asparagus officinalis (garden asparagus): 109849659
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Entry
109849659 CDS
T05243
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109849659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109849659
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109849659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
DUF3192
Motif
Other DBs
NCBI-GeneID:
109849659
NCBI-ProteinID:
XP_020275106
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All DBs
Position
7:complement(79952007..79960744)
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AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVF
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatttgttgccgcatctacactcaggatgggcggtggatcaggcgatcctggcc
gaggaggagcgcctcgtcgtcatccgctttggccacgactgggacgagacttgcatgcag
atggatgaagtgctgtcttcggttgccgagactataaagaactttgcagtgatatacttg
gttgatatcacagaggtaccagacttcaacaccatgtacgagctttacgatccatcgaca
gtcatgttctttttccgcaacaaacatatcatgatcgatcttggaactgggaacaacaac
aagatcaactgggccatgaaggacaagcaggagttcatcgacatagttgagaccgtgttt
agaggtgcaaggaaaggacgtggtcttgttattgctcccaaagattactccaccaagtac
cgatactga
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integrated database retrieval system
