Asparagus officinalis (garden asparagus): 109849679
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Entry
109849679 CDS
T05243
Name
(RefSeq) LEC14B protein-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109849679
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109849679
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD_LRWD1
PROPPIN
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WDR54
Motif
Other DBs
NCBI-GeneID:
109849679
NCBI-ProteinID:
XP_020275126
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Position
7:complement(26124189..26138972)
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AA seq
480 aa
AA seq
DB search
MGYNMSKPGLDSCISDTDSDDGASSRQMCDEPLHKDHEFFQLTKLRSEPSESARKAGHTG
RKMPISTVKMLSGRETNYSGKGRFSSADRSHLLGRYLPVNGPWPVDRMDTRAYVSQFSSD
GSLFIAGFQGSHIRIYNVDDGWKVQKDILAKSLRWTITDTSLSPDRRFLVYASMSPIVHI
VNVGSSAMESHANINDIHDGLDFSMYAHGAFSFGIFSVKFSTDGRELVAGTSDDSIYVYD
LEANRLTSRFPAHTSDVNTVTFADDTGNLIYSGSDDSLCKVWDRRCFATKGKAAGVLTGH
LEGITFIDSRGDGRYFISNGKDQGLKLWDIRKMSSNASSFRPRISDWDYRWMEYPPSAKQ
FKHPFDQCVATYRGHAVLRTLIRCYFSPAHSTGQRYIYTGSHDNCVYIYDVVTGDRVAKL
DCHQLTVRDCSWHPYYPMLVSSSWDGLIARWEFPGNEAVPPLKKKNCVVIEDQMFRAIYL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggttacaatatgagtaagccaggattggattcttgcattagtgacactgatagtgat
gatggagcttcttctagacaaatgtgtgatgaacctcttcacaaagatcatgaatttttt
caactgaccaagctccgttcagaaccaagtgaaagtgcccgtaaagctggccatactggg
aggaagatgcctatatcgacagttaaaatgctgtcaggtagggaaactaattattcagga
aaggggaggttctcttctgctgatcgctctcatcttcttggacgatacttgcctgtcaat
ggtccatggcctgttgaccgaatggatacccgggcatatgtgtcccagttctcttctgac
ggttcactatttatagcaggatttcagggaagccacatcagaatatacaatgttgatgat
ggatggaaagtgcaaaaggatattcttgctaaaagtttgaggtggactatcacagataca
tccctttcaccagatcgccggtttcttgtttatgctagcatgtcacctattgttcacatt
gttaatgtgggtagttcagcaatggaatctcatgctaacattaatgatattcatgatggc
ctggacttttctatgtatgcgcatggggcattctcttttggcatattctccgtgaaattt
tcaactgatggtcgagagcttgtcgccggaactagtgatgattcaatatatgtttatgat
ttagaagcaaatagattgacatcacgttttccagctcatacatctgatgtgaatacagta
acttttgctgatgacactggcaaccttatatattctgggagtgatgatagcctctgcaag
gtctgggacagacgctgctttgccacaaagggaaaagcagctggcgtcttgactggccat
ttagaaggtataacattcattgatagccgtggagatgggcggtatttcatctcaaatgga
aaagatcaaggtttaaagctgtgggacattcgaaagatgtcctccaacgctagtagcttc
agacctagaatttctgattgggactacagatggatggagtacccacctagcgctaagcaa
ttcaaacatccatttgatcagtgtgtcgctacatatagaggacatgcggtccttcgtact
ctaatacgttgttatttctcacctgcccatagcactggtcagaggtacatatacactggg
tcccacgacaattgtgtttatatctatgatgtggtgactggagaccgcgttgcaaaacta
gactgccaccagctaactgtaagagactgcagctggcatccatactatcctatgcttgtg
agctcgtcttgggatggattgatcgctagatgggaattccctggcaacgaagcagttcct
cccttaaagaagaaaaactgtgtggttattgaagatcaaatgtttcgtgccatatatttg
taa
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