Asparagus officinalis (garden asparagus): 109849782
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Entry
109849782 CDS
T05243
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109849782
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109849782
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Helicases
109849782
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109849782
NCBI-ProteinID:
XP_020275246
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All DBs
Position
7:complement(139147308..139156995)
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AA seq
598 aa
AA seq
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MTTNSIDKHNPKEEEEDEEVSFEELGLDPRLIRALSKQCITKPTPIQREGIPLILEGKDV
VARAKTGSGKTFAYLLPMLQKLFADTGSRNAAPKVFILVPTRELCQQVHRESHSLLEFCR
VQLQVVQLTSSMQAPEMTAALSGPPDVVVSTPACISSCLSKGILQASSITESLSMLVLDE
ADLLLSYGYEDDLKVLIPHVPRRCQCLLMSATTSSDVEKLKKLVLHNPVILTLSEIKDSK
DEIIPKNVQQFWISCSARDKLLYILTLLKHELVQKKVIIFVNSIDMGFRLKLFLEQFGIR
SAVLNAELPQNSRLHILEEFNAGLFDYLLATDDNQIREKEKEVKESHIQPKHSKKHLRQK
LDAEFGVVRGIDFKNVFTVINLDMPKDPAGYIHRIGRTGRAHNIGASVSLVAPSEEEVFK
EIKLLLGDDENQDTSRSIVPFPLLTKNAVENLRYRAEDVAKSVTKIAVKESRAQDLRNEI
LNSEKLKSHFQDNPKDLDLLKHDKLLSKKAPPGHLRDVPEYLVDPKVQENTKMVKLSRAA
MGIKSRRNTGVKKRSRKNRDPLKTLSMEGKKKRRTDRGPEAAGSHNTKKARKADKVLG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaattcgatcgacaaacacaacccgaaggaggaggaagaagatgaagaagtg
agcttcgaagagctcggcctcgatccccgattgatccgcgctctctccaagcaatgcatc
accaaacccactcccattcagcgcgagggcatccccttgatcctagaaggtaaagatgtt
gttgctcgagcaaagacgggttcagggaaaacatttgcctatcttctaccgatgcttcag
aagctatttgctgatactggttctagaaatgctgctccgaaggtgtttatcctcgtcccc
acaagagagctctgtcaacaggttcatcgggagtcgcattcgcttctcgagttctgcaga
gttcagctgcaagttgtgcagctgacaagcagtatgcaagctccagaaatgactgcggca
ttatcagggccaccggacgttgtggtgtcaaccccagcttgcatttcgtcgtgcttatcg
aaaggtattcttcaggcatcatccattacggagtcactttcgatgctggttcttgatgag
gctgacctccttttgtcatatggctatgaggatgacctgaaggttctcatcccccatgtt
ccacgacgctgtcaatgccttctaatgtctgctaccacaagttcggatgttgaaaaattg
aagaagcttgtgttgcataatccagtaattttgaccctgtcagaaataaaagactccaag
gatgaaattatcccaaaaaatgtgcagcagttttggatctcatgcagtgctcgtgataag
ctactttacatccttactctcttgaaacacgagcttgttcagaaaaaagtgataatattt
gtcaattcgattgacatgggttttagattgaagctatttcttgaacagtttgggataaga
tctgctgtcttgaatgctgaattgccccagaattcacgtcttcatattctcgaggaattc
aatgcaggattatttgattatctactagcaacagacgacaaccagatcagagagaaggaa
aaagaagtcaaggaaagtcacatccaaccaaaacattcaaaaaagcacctgaggcaaaaa
ttggatgcagaattcggggtagtgagaggaatcgacttcaagaacgtttttacagttatt
aatcttgacatgccgaaagaccctgcaggatatatacacaggattgggcgtacggggaga
gcgcataacataggtgcctctgtctctcttgttgctccttcggaggaagaagttttcaaa
gaaattaaactcttactgggagatgatgaaaaccaagatacgtcaagatctattgtgcct
ttccccttattgactaagaatgctgtggagaatttgcgatatagagctgaggacgttgct
aaaagtgtaacaaaaattgcagtcaaagaatcacgtgctcaggatctaaggaacgaaata
ctaaattcggagaagttgaagtcacattttcaagataacccgaaggacttagatctattg
aagcatgacaagctgttgagcaagaaggcaccacctggtcatttgcgtgatgttccagaa
tatcttgtcgaccctaaagtacaagagaacaccaagatggttaagctttccagagcagca
atgggtatcaagtcaagacgaaatactggggtcaagaagagatctcgcaagaatagagat
cctctcaagactctctccatggagggaaagaaaaagagaagaacagatagaggcccagaa
gctgcaggtagccataacacgaaaaaggcgaggaaggctgacaaagttctaggatag
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