Asparagus officinalis (garden asparagus): 109849785
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Entry
109849785 CDS
T05243
Name
(RefSeq) TBC1 domain family member 5 homolog B-like
KO
K18469
TBC1 domain family member 5
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109849785
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109849785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
109849785
NCBI-ProteinID:
XP_020275253
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All DBs
Position
1:11380705..11385433
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AA seq
797 aa
AA seq
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MSPDPIELPLPEELPQDSGDLRFSNLRGVRWRIDLRILPSSPSSSIEELRRVAADCRRRY
ARLRRLLLIDPHLPKDGSRSPDLTMDNPLSQNPDSTWRRYFKNAELEKLVDQDLSRLYPE
HEDYFQTPACQAMLRRILLVWCLRHQEYGYRQGMHELLAPLLYVLHVDLQYLSQVRALYE
DCFSDEFDEMGFPDGDFTSNYRFTKSSSWDSRTDGDFQEKNNHKVTTLDDLDPETKELFL
LSDAYGAEGELGVILSERFLEHDAYCMFDGLMSGAHGVVAMVDFFSPSSAIGSSNALPPV
IEASSSLYHLLSAVDSSLHAHLIELGVEPQYFALRWLRVLFGREFSLDDLLLIWDELFSS
SNTSSLVDDLEYNFKILCSPRGALIAAMAVSMLLHLRSSLLATENATSCLQRLLNFPQNI
DVKKLIGKAKSWQALALETNILSLSHNNLKPEVGRVRSFPTNAGSSRTRNKSDSYWEEKW
RVMHKEITSQNNGGDLVSHGKIKKLLGNGFGLARTKSDSSTSKEDSQSPTAKCRVLDGLT
DMNQKTESDGAPELANGNESSYLEVDGEKLLAEEPNDQFVTGRMSNSTLEETCLSEENSS
VFSTANNPHNMENDHDNDSEKSSISSNSSVADNDEDPSHVEDNRDLESICSTNTTAAGTH
EVAPNNNREMKQRVGLKDWKQLSGKFPWFLKFRRGSGEVNSEKEALSVESVSEGVPGDSN
SDCKSCGDSGRMGVGDKKVIGTLKNLRQSMLENIQVIESVFQQERTQAGNVLGGKGQATA
MAALKELRKISNILSEM
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagacccaattgagcttcccttgcccgaggaattgcctcaggattcgggtgac
ttgaggttttccaatctgaggggggttcgttggcggattgacttgaggattcttccatct
tctccttcctcttcgatcgaggagcttcgtcgtgttgctgctgattgcaggaggagatat
gcgagactgagacgtcttcttctcatagatcctcatctccctaaggatggaagcagatcg
ccagatcttaccatggacaaccctttatcacaaaatccagatagcacttggagacgctat
ttcaaaaatgccgagttagagaagttagttgaccaggatttatcgcggttgtaccccgaa
catgaggactactttcagacacctgcatgccaggccatgttaagaagaatattgttggtg
tggtgtcttcggcaccaagagtatggatatagacaaggaatgcatgaactattggctcct
ctactttatgtcctccatgttgatctccagtacctctctcaagtccgagcactctatgaa
gactgcttcagtgatgaatttgacgagatgggttttcccgatggcgacttcacttccaac
taccggttcacaaagtcttcaagctgggattctagaactgatggtgattttcaagaaaaa
aacaaccacaaagtcaccacccttgatgaccttgatcctgagacgaaggaattgttcttg
ctaagtgatgcctatggagctgaaggtgagttaggtgtgatcctctctgaacggttccta
gagcatgatgcttactgtatgtttgatggtttgatgagtggggcccatggagttgttgca
atggtcgacttcttctccccatcctcagccattggatccagcaatgccttacctcctgta
attgaagcttcttcatctctgtaccatctgctctctgcagtggactcttctcttcatgcc
catcttattgagcttggtgttgagcctcagtattttgcactcagatggcttcgtgttctc
tttggtcgggagttctcccttgatgaccttttgctgatatgggatgaacttttttcttct
tctaatacttcttccctagtggatgatctagagtacaacttcaaaatcttgtgctctcct
cgtggagccttgattgcagcgatggctgtatcgatgcttcttcatttaagatcttctttg
ttagccacagagaatgccacctcttgcctccagagacttctcaactttccacagaatata
gatgttaagaaactgataggaaaggcaaagtcttggcaggcacttgctcttgagaccaac
atcttatctctatcacataataatttgaagccagaagttggtagggtccgcagctttcca
accaatgcaggttcatctagaactcgaaacaaatctgatagttattgggaagagaagtgg
agagtaatgcataaagaaataacatctcagaataatggcggtgatctggtttcacatgga
aagataaagaaattgttaggcaatgggtttggtttagcaaggacaaagtcagattcttca
acaagtaaagaggattctcaatcaccaacagctaagtgtcgggttcttgatggtttaact
gacatgaatcagaagacggaatctgatggagctccggaacttgctaacggaaatgagtct
tcctatctggaggttgatggggagaaacttttagctgaggaaccgaatgatcaattcgtt
acagggaggatgtccaactccacactagaggaaacttgcttgagtgaagagaactcttct
gtgttctctacggctaataaccctcataatatggaaaatgatcatgataatgattcagaa
aagagtagcattagttcaaattcttctgttgcagacaatgatgaagatcctagtcatgtg
gaagataatagagatttggaatccatctgctctactaatactactgctgctggcacacat
gaagttgcacccaacaacaaccgggaaatgaaacagagagtggggttgaaggattggaaa
caattatctggtaagttcccatggtttttaaaattcaggagaggctctggtgaagtgaac
tcggagaaagaggcattgagtgttgaaagtgttagcgaaggagttcctggcgattcaaat
tcagactgcaagagctgtggagatagtgggaggatgggagttggagataagaaagtgata
ggtactttgaagaatctcaggcaatccatgcttgaaaatattcaggtgattgagtcagta
ttccagcaagaacggacgcaggctggtaacgttcttgggggcaaagggcaagccacggca
atggcagccctcaaggagctcaggaaaattagcaacatattatccgagatgtga
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