Asparagus officinalis (garden asparagus): 109849896
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Entry
109849896 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109849896
04121 Ubiquitin system [BR:
aof04121
]
109849896
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109849896
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109849896
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109849896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
DUF4484
CCD
Motif
Other DBs
NCBI-GeneID:
109849896
NCBI-ProteinID:
XP_020275369
LinkDB
All DBs
Position
7:complement(23697006..23699213)
Genome browser
AA seq
345 aa
AA seq
DB search
MDESLAASRYWCHMCSRIVDPVMEVEIKCPLCNGGFIEEMEAQENPAPSSANNPNSTSDS
DQDLSLWAPILLSMLNDGLRRRRRSQMNEGQEEESNAASEQDNELASLLRRRRRTSAILD
VLTDIQQRLHIRDQEQGERQGEHMILINPFNQAVIIPGGAIDPTSINRNIRASVGDYFIG
PGLDQLLQHLAENDPNRQGTPPASKEAVEAMARIKIEEKIGSCYVCLEEFEIGEEAREMP
CKHKFHEGCILPWLEAHSSCPVCRFQMPVEGPKNESIGAGNGSTGASGGSRGGGNGNGNN
GSGGRSWMPVPWPFSGLFSSSSSSPSQNGGDGNGNSLSEDGPDEH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcattggctgcttctagatattggtgccatatgtgctcaagaattgtggac
ccagtaatggaggttgagatcaaatgccctctctgcaatggtggattcattgaggaaatg
gaagcccaagaaaacccagcgccttcctccgctaataatcccaattcaacgtctgattct
gaccaggacctctccttgtgggcccccatcctactcagcatgctcaacgatggcctccgc
cgtcgccggaggtctcagatgaatgaaggacaagaggaagaatcaaacgcagcctctgaa
caagacaatgagctcgcgtccctcttacgtcgacgccggcgaacttcggccatcctcgac
gtcctcacggacatccaacaaaggttgcacatcagagaccaagaacaaggagagagacag
ggagaacatatgatcctaatcaatcccttcaaccaagctgtgatcatcccggggggagcc
attgatcccaccagcataaaccgcaacatcagagcttcggtaggggattatttcatcggc
cctggcctcgatcagctgctacaacatttggctgagaatgatcctaataggcaagggact
cctccggcgagtaaagaggcggtcgaggcgatggctagaattaagatcgaggagaaaatt
gggagttgctatgtctgtttggaggagtttgagataggggaggaagcgagggagatgcct
tgcaagcataaatttcatgaggggtgtatattgccctggcttgaggctcatagttcgtgc
cccgtctgtaggtttcagatgcccgttgaggggccgaagaacgagtccattggcgctggc
aatggtagcacaggcgcaagtgggggtagtagaggaggaggtaacggcaatggtaataat
ggcagtggggggaggtcgtggatgccggtgccttggccttttagtggattgttttcgtct
tcgtcttcgtcgccttctcaaaacggaggggatgggaacgggaattctctgtcagaagat
ggtcctgatgagcattga
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integrated database retrieval system
