Asparagus officinalis (garden asparagus): 109849952
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Entry
109849952 CDS
T05243
Name
(RefSeq) flap endonuclease GEN-like 2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109849952
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109849952
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Chromo_2
Motif
Other DBs
NCBI-GeneID:
109849952
NCBI-ProteinID:
XP_020275439
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All DBs
Position
7:complement(76419200..76426179)
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AA seq
585 aa
AA seq
DB search
MGVKNLWDILESCKQTLPLHHLQNKRLCVDLSCWLVQLQNASKSQCGFRDKIYLRSLFHR
IRVLIALNCSLIFVTDGSIPSIKLSTYRRRLGSVPEVNQEETNSQPLHSLRRNMGSKFSC
MIKEAKVLGSALGIPCLDGLEEAEAQCALLNSESLCDGCFSSDSDIFLFGAKTVYRDIIL
GEGGYVICYEMTDIEKKLGFGRNSLISLAVLLGSDYSQGVRGFGPETACRLVKSIGDDKV
LPRIQSEGLAFARKCKVTTKSAKDLHYDANKENDHCYILCSDADGKNKGPDDQFLKVIDA
FLKPKCHSPDSDSVQRACTQHPFIRTQLQQICTRFFDWSPDKTDEYILPKIAERDLRRFA
NLRSTSSKLGVRIPLDKMPVPCPVFAIVKQRKVQGKDYFEVSWREMEGLQTSXXXKVGVV
VKSILPNDLLCSACPEKIAEFMEKKLEGKKKQNRRPRPEKSTKTDVREVDLQLKSLTLST
ESDSSIITNTMKSQELKSLHNAKQSEAFIDLSSPSPPLRACKLAKHINIDKVSDIIDICE
PETGNKDKYVDVIDICESESEASPEHEKKAKELRLFINSIRRELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcaaaaatctatgggatatcttagaatcttgcaagcaaacccttccccttcac
catctccagaacaagagattatgcgttgatctctcatgctggctggtgcaattacagaat
gcgagtaaatcgcaatgtggttttagagataaaatttatctgaggagtttgtttcatagg
attagggttttgattgctctaaattgcagccttatctttgttacagatggctcaattcct
tccatcaaattatccacatatagaaggcgtctgggttcagtgcctgaggttaatcaagag
gagacaaattcacagcccctgcattcactacgtagaaacatgggttccaagttctcgtgc
atgattaaggaggcaaaagttcttggatctgcccttggtattccttgcttagatgggcta
gaagaagcggaagcacaatgtgcactgctgaactcagaatccttatgtgatggatgcttc
agttcagattcagacatcttcctatttggagcaaagacagtgtatagagatattatctta
ggcgagggtggctatgtaatatgttacgagatgacagatatagagaagaaacttgggttt
ggaaggaattcactgatttctttggccgttcttcttggcagtgattactcccaaggggtt
cgtggttttgggccagaaacagcatgtcggcttgttaaatcgataggggatgacaaggtc
ctgcctaggattcaatctgaggggttagcatttgcaaggaagtgtaaagtgacaacaaag
tctgcaaaggatctccattatgatgcaaataaagagaatgaccactgctatattctgtgc
agtgatgcagatgggaaaaataaaggaccagatgaccagtttttgaaagtaattgatgca
tttttgaagccaaaatgtcattcacctgactcagactctgtacagagagcatgcactcaa
catccatttataagaacacaacttcaacagatatgtactcgattttttgattggagccct
gataaaacagatgaatatatccttcctaagattgcggagagagatctaagacggtttgct
aacctacgttccacatcatcaaaattgggagtaagaattcccttggacaagatgccagtt
ccttgtcctgtatttgctattgtgaagcagagaaaagtacagggaaaagactactttgag
gtttcttggcgagaaatggaagggcttcagacctcnnnnnnnnnnaaggtaggtgtggtt
gttaaatccattctacctaacgatttattgtgcagtgcatgcccagaaaagattgccgag
ttcatggagaagaaacttgaaggaaagaagaaacaaaatcgaaggccaaggccagagaaa
tcaaccaaaaccgatgtaagagaagttgatctccagcttaagagcttaacgctgagcaca
gaatcagatagcagtatcatcactaatacgatgaagtctcaagaactgaaaagtctacac
aatgctaagcaatctgaggcattcattgatctttcaagtccatctccacctctgcgtgca
tgtaaacttgccaagcacataaatattgataaagtatctgatataattgatatatgtgaa
ccagagactggaaataaagataaatatgtggatgtaattgatatatgtgagtcagagagt
gaggcttctcctgaacatgagaagaaggctaaggagttgagattatttataaacagtatt
cggagagaactttactag
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