Asparagus officinalis (garden asparagus): 109850059
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Entry
109850059 CDS
T05243
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109850059
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109850059
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
109850059
NCBI-ProteinID:
XP_020275561
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All DBs
Position
7:complement(46224657..46227874)
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AA seq
440 aa
AA seq
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MEYSRLFRAERFKLGQIHNRVALETTLKLACFSWLVICVPRPCRGQEVFDVTKYGAISNG
KTDNSKAFSDAWSAACKHRGAASFLIPKGSFLLGQIIFQGPCSNNTSPKFEIKGKLLAPA
SPTSITTIAWLEFRALNKLIIEGGGVVDAQGATSWNLTRCTGRNCHNSPLSTRFIKISNA
TIANLTLLNSKGYHMAIQRSNFVTVLNLNISAPGDSPNTDGLHISDCNNINVTRLAIGTG
DDCISIGPGNNNVSISGVNCGPGHGISVGGLGKYMDDKDVIGVKVNNCTISNTQNGIRIK
TWPGSQPGRASNFKFEDIIVNNVSRPIIIDQEYCPKKTCSNKPSLFKVNNVTFNRISGTS
SRPVAVNLKCSSSVPCENVKLHDVNLEHINGAASDITSKCFNVKGLVATSKKPDSTLSKS
LAKCFQTHQVKILQVHKDEV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagtattcaaggctctttcgtgcggaaagattcaaacttggccaaatacataatcgt
gtagccttagaaacaaccctgaaacttgcttgtttctcctggttggtaatatgcgttccc
cgaccttgtcgtggacaggaggtcttcgacgtgaccaagtatggagcaatttccaacggg
aaaactgataatagcaaggcgttttcagatgcttggagtgctgcatgtaaacacagagga
gctgcaagcttcttgatcccgaaggggtctttccttcttggccaaatcatctttcaaggc
ccttgctccaacaacacgtctccaaagtttgagatcaaggggaaattactagcccccgca
agccccacaagcataactacgatcgcttggttggaattcagggctcttaataagctcatt
atcgagggtggtggcgttgttgatgcccagggcgctacctcttggaatctaacaaggtgt
acagggaggaattgccacaactctccactgtcaacacgattcattaagatcagcaatgca
acaatcgccaatctaacgcttcttaatagcaagggctatcacatggccattcagaggagc
aattttgtgaccgtgttgaacctcaatatatccgcacctggagatagcccgaacactgac
ggactccacataagtgactgcaataatatcaatgttactcgcctcgccatcggcactggt
gatgactgcatctccattggcccaggtaacaacaatgtgtcaatctctggcgtaaattgt
ggccctggacacgggatcagtgttgggggtctaggaaagtacatggatgacaaggacgtg
attggggtaaaggttaataactgcacaatttcaaacacacagaacggtatccgtatcaag
acgtggcctggttcgcaacctggtcgagcttcgaacttcaaatttgaagatatcattgtg
aacaatgtctcccgtccaatcatcatagatcaggagtattgtcccaaaaaaacatgctca
aataagccctccttgttcaaggtaaataacgtgacgtttaataggatatcggggacatca
agtcgccccgtcgcggtgaacctgaagtgcagttcctcggttccctgcgagaatgtgaag
ctccacgacgtaaacttggagcacatcaatggtgctgcctccgatatcacctctaaatgc
tttaatgtcaagggactcgttgccacatccaagaagcctgatagcacgctttcaaagtca
cttgcaaaatgttttcagacgcatcaggttaaaattttgcaggtccacaaggatgaagtt
tga
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