Asparagus officinalis (garden asparagus): 109850065
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Entry
109850065 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109850065
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
109850065
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
109850065
NCBI-ProteinID:
XP_020275575
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All DBs
Position
7:58760622..58772452
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AA seq
292 aa
AA seq
DB search
MHGGPSGFNNAPVTRTVVIASGILTVIFGIRSRSIRLGLSYQEIFKHLRLWRFVASEFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVLASFLFEVLALVLLKDSTSSLASG
PYGLIFASFVPFYLDIPVSSRFRIFGINISDKSFIYLAGLQLLLSSWKRSLVPGLCGILA
GVLYRVNAFKIRRVKFPEFISSFFARLAWSSGSSSRTSQRKCIQNLPSAAARRVERNYQA
AARPAMPDPPESSIATLVSMGFDSNAARQALLRARNDINVATNILLESHQSY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcggcccatctggatttaacaatgctccggtgaccaggacggttgtgatcgcg
agcggtatcctcaccgtcatctttggcatcagaagccgttctattaggcttgggttatct
tatcaggaaattttcaagcatctcaggctttggagatttgttgcttcggagtttgctttc
tcatcaacgccagagttaatgtttggtctatacttgctctattatttcagggtatttgag
cgacagattgggtctaacaaatattcagtcttcattttattctcggtattggcatcattt
ctttttgaggtcctagctttagtgcttcttaaagattctacaagctcactggcatctggg
ccttatggtcttatatttgcctccttcgtacccttttatcttgatattcctgtctcctca
cggttccggatatttggcataaacatcagtgacaagtcatttatatatctggctggtctt
cagcttctcctatcatcgtggaagcgttctcttgtacctggattgtgtggtatacttgct
ggtgtcttatatcgtgtcaatgcattcaagatccgaagggttaagtttccagaattcata
tcatcattttttgcgcggttagcatggtcctcaggaagctcgtcacgtacatcacagagg
aaatgcatacaaaacttaccttctgctgctgctcgtcgtgtagagaggaactatcaagca
gctgcgagacccgcaatgccagatcctccggagtcttctattgctacactcgtatcgatg
ggctttgatagcaatgcagcgaggcaggcccttttgagggctagaaacgacatcaacgtc
gccacaaatatccttctggaatctcatcagtcttactga
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