Asparagus officinalis (garden asparagus): 109850084
Help
Entry
109850084 CDS
T05243
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109850084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109850084
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109850084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR41
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
109850084
NCBI-ProteinID:
XP_020275588
LinkDB
All DBs
Position
7:132978300..132993460
Genome browser
AA seq
728 aa
AA seq
DB search
MITGGNNFVSSAPVFSNDAKKLLVCTGNTVSIFSTDTGMLVTELEGHTDLVTSVVVVPVA
ANARKFMCYCWTSSRDSTICYWDFAAPELVKKIKVQLPIVSMVIPHISSLSADSSEKLSN
LYAFVSVEDINKPADQRKALRGQIQIYNLTNSRRVGGLLAETRRPELISMSSSGEFIGIK
NKQKIYTWRIPTKEFKYDDIRRIKLHHTKKFNTLAFHPSERIIAGGDVTGRILIWRGFGK
RNLSETSRKLSAGRTNNEEGNPGVRGNDDADSCSTWHWHPEAVHILFFSSDGAYLYSGGK
EGVLVVWQLDTGKKRFKPRLGSPLLYYTHSPDPSLSCISCADNSIHLIKMPSMAIVKSIG
GIKLPFSFPDMHKRPSSDFAFDYSSGLVALRTSDHCIQFFSLFENFEVSQVQVCERNFQP
VDDPMVFVALMSLSGDGSMMSTVEVRLPEEGLGDLITLKFWARGSRVGEYNLVTVIYEPH
SYAEVSALAFRSGYRMAVSTSLGGEFKVWLYYSDKQKDHQKSGWRCQSVGSYKKMPMTAA
AFSADGSVLAVAAETVVTLWDPDKNALVAVIGDTFTPITTISFAGKSDYIVTLSQGSNPQ
LAVWDLSNLSIVWSYKLRAEAVACTEDLSQFAVLVLPEVPNGPATGDQNGIILLFDVKKP
VPLATWMVKKAKKGSLAFMPPDTSRQHTDVEDADGSGIPLLVYINGDHEYIIFDPHKGQI
PEISRNSH
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaggaggaaacaacttcgtgtcatcagctccagttttctccaatgacgcgaaa
aagctgctcgtttgcactggaaacaccgtctcaatcttcagcaccgacaccgggatgctg
gtaacggaattagagggccacactgatttggttacttcagttgttgttgttccggttgcc
gcgaatgcgaggaaatttatgtgttattgctggacttcgtcgagggattctaccatttgt
tattgggattttgcggcgcctgaattggtgaagaagatcaaagttcagcttcctatagta
tctatggttattcctcatatctcaagtctttcagctgatagcagtgagaagctttccaac
ctctatgcatttgtttctgttgaggatataaacaaacctgctgatcagcgcaaggcattg
cgtgggcagatccagatttacaacttaaccaattcacgtcgtgttgggggattgttggct
gagacccgcagaccagagttaatatccatgagcagttctggagaattcatcggcattaag
aacaagcaaaaaatatatacatggagaattccgacaaaggagttcaaatatgacgacatt
aggaggatcaaattgcatcacaccaaaaagtttaacactctggcgtttcatcctagtgaa
agaataattgccggtggagatgtaactgggagaattttgatatggagaggctttggaaag
cgaaacttgtcagaaacttcaagaaaattgagcgcaggtagaaccaacaatgaggaaggg
aatcctggggtaagaggcaatgatgacgcagactcctgttcgacctggcattggcatcca
gaagcagtacatattctcttcttttcctcagatggagcttatttatattcaggtggaaaa
gaaggagtccttgttgtctggcaattggatactgggaagaaaaggtttaaacctcgtctg
ggctccccgcttttatattatacacattctcctgatccttctctttcatgtatatcttgc
gcagataattcaattcacctaataaagatgccttccatggcaattgtcaagtctattggt
gggataaagcttcctttctcatttccagatatgcacaaacgacctagtagtgattttgcg
tttgactattcctctgggctagttgctcttcggacttccgatcattgtatacagttcttc
agcttgttcgagaactttgaagtttcacaggtgcaagtatgtgaaagaaatttccagcct
gttgatgatcccatggtgtttgtggctttgatgtctctttcaggagatggctccatgatg
agtactgttgaggttaggcttccggaagagggattaggggatcttataactctgaaattt
tgggcccgggggtctcgagttggagaatataatttggttactgtcatctatgagccgcac
agttatgcagaagtttctgctcttgcattccgatctggctatagaatggctgtaagtact
tctttgggtggcgaatttaaggtttggctctattattctgataagcagaaagatcaccag
aaatctggatggagatgccagtctgttggatcgtacaagaaaatgcctatgactgctgct
gcattttctgctgatggctctgttctagctgttgcagcagagactgttgtaacattgtgg
gaccctgacaagaatgctcttgtggctgtaattggagatacgttcacgccgattactaca
atctcttttgctgggaagtcagattatattgtgacactatctcaaggttcaaatccacag
ctagctgtttgggatttgtcaaacctttcaattgtttggtcttataaacttcgtgcagaa
gccgtagcttgtacagaagatttgtctcaatttgctgtcctagtcctgcccgaagtacca
aatggacctgctacaggagaccaaaatggtatcattttgttgtttgatgtgaaaaagcct
gttcctctggctacatggatggtgaagaaggcaaaaaaaggcagtcttgcttttatgcct
cctgatacatctcgtcagcataccgatgtagaagatgctgatggaagtggcattcctttg
ttggtatatataaatggtgatcatgaatatataatctttgatccacacaaaggacagata
cccgaaatcagcaggaattctcattaa
DBGET
integrated database retrieval system
