Asparagus officinalis (garden asparagus): 109850096
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Entry
109850096 CDS
T05243
Name
(RefSeq) syntaxin-52-like
KO
K12191
charged multivesicular body protein 2A
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04130
SNARE interactions in vesicular transport
aof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109850096
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109850096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109850096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109850096
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
109850096
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109850096
Exosomal proteins of other body fluids (saliva and urine)
109850096
Exosomal proteins of colorectal cancer cells
109850096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
NPV_P10
Dak1
DUF4763
FapA
DUF5345
Syntaxin_2
NagJ_C
Motif
Other DBs
NCBI-GeneID:
109850096
NCBI-ProteinID:
XP_020275603
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All DBs
Position
7:1789997..1794315
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AA seq
202 aa
AA seq
DB search
RGSLPSSGPDAQRHTSAIRRKITILGTKLDSLESLLSKVPRKQPKDKELQKCQDMLANLK
SRTKQMGSALNMSKFANREDLFGPSKISVEDRTSGLDNHGIVGLQRQMMKEQDQGLDKLE
ETVFSTKHIALAVNEELDLHARLIDNLDQHVDVTDSRLQRVLKRLAILNKRTKAGCSCGC
LLILVVVIVILAAVVWALLKYL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
aggggttcactgccctcatcaggaccagacgctcaaaggcacacatctgcaattaggagg
aagataacaattcttggtacaaaactagacagtttggagtcccttttgtcaaaggttcca
agaaaacagccaaaggataaagagttgcagaaatgccaagacatgcttgcaaatctgaag
tctagaacgaagcagatggggtctgcattgaacatgtccaagtttgctaacagggaagat
ttgtttgggcctagtaaaatatcggttgaggaccgaacttcgggtttggacaaccatgga
attgttggattacaacggcagatgatgaaagagcaagatcagggccttgacaagctagag
gagacagtctttagcacgaaacatattgccttggcagtgaacgaagaattggatcttcat
gccagattgatagataatttggaccaacatgtggatgtcacagactcgaggcttcagcgc
gtgctgaagagacttgctattctgaacaaacgaacaaaggcaggttgctcgtgtggatgt
cttctaattttggtggtggttattgtgatattggctgctgttgtttgggctctcctcaaa
tatctgtaa
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