Asparagus officinalis (garden asparagus): 109850270
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Entry
109850270 CDS
T05243
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109850270
09124 Replication and repair
03420 Nucleotide excision repair
109850270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aof03051
]
109850270
03400 DNA repair and recombination proteins [BR:
aof03400
]
109850270
Proteasome [BR:
aof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109850270
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109850270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
CUE
Motif
Other DBs
NCBI-GeneID:
109850270
NCBI-ProteinID:
XP_020275835
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All DBs
Position
7:2242965..2246672
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AA seq
204 aa
AA seq
DB search
MNVSSLLINIQLIIFGVSTLMAPVYDGPASNLVPGNNLESMVHQLMDMGGGNWDKDTVHR
ALRAAYNNPERAVEYLYSGIPTLGEAAQAEGPNTTGTAAEGDTLSVLPNSAPLDMFPQGA
PSVGGGASGGSLDFLRNNEHIPISSANEDLQQVFSHKRRIFALKKKDIANPNIMHRWIKH
FQSCKQDCLSINAYSKSSVNQQEA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaagttctcttctgatcaacattcaactgattatatttggtgtttctactctc
atggcccctgtttatgatggacctgcatctaatttggtaccaggaaacaatctggaatca
atggttcatcagctgatggatatgggtggtggtaactgggacaaggatacggttcaccga
gcacttcgtgctgcttacaataatccagagcgtgctgtggaatacttatattctggaatc
cctacattaggagaagctgctcaggctgaagggccaaacacaactgggacagctgctgaa
ggcgatactctgtctgtattgccaaattctgcacctctagatatgtttccacagggagct
cccagtgtgggtggaggtgctagtggtgggtctcttgatttccttagaaataatgaacat
ataccgatatcttctgcaaatgaagatcttcaacaagtgttttcacacaagaggcgcata
tttgctctaaaaaagaaggatattgcaaatcccaacataatgcatcgctggataaaacat
tttcagtcgtgcaagcaggattgcctttcaattaatgcgtacagcaaaagttctgtcaac
cagcaggaggcctag
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