KEGG   Asparagus officinalis (garden asparagus): 109850458
Entry
109850458         CDS       T05243                                 
Name
(RefSeq) DNA repair protein UVH3
  KO
K10846  DNA excision repair protein ERCC-5
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109850458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109850458
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109850458
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2 Adhes-Ig_like
Other DBs
NCBI-GeneID: 109850458
NCBI-ProteinID: XP_020276066
LinkDB
Position
7:61554631..61574240
AA seq 1495 aa
MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDERGEMLRNAHVLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTIASRRRHRENAQAKIRKTAEKLLLNHLKAKRLE
ELAQEMRKTKDEKSDAKGKQVVTDENQGDNQEPDKKSIKALTQEALDEMLAASLAAEEEE
VFNAKKTTSAGNVQQEGEEEEDEDEEMIFPVTSGKVDPSVLASLPPSMQLDLLVQMRENQ
MAENRQKYQKIKKTPSKFSELQIQSYLRTVAFRREIDEVQKSAAGRGLGGVQSSRIASEA
NREFIFSSSFTGDKQMLSAKSVEKNGDMVNQSTKKTINLDSVKHSLFASQSQTKSPADKV
TSDFGDDVETYCDGSGRMRVSRVRGLGIHMTRDLQRNLDLMKESEQDYSRGGMRTDLQSE
CIKEASSAKGNCETNSCYNASVSIEGNSETTIRETGTLTQEDNHCSDDLSALGRKPLIEI
SFSEDDDGMKDADDNLFLQLVSGNSPSQLCASIHSDSSENESESECIWEEGTVGEKKEGL
QNDQNKEDRSSLAEDKSCEKCEMEWEEGDCDVPKDVSNCYAGQEKAVSRGFLEEEADIQE
AIRRSLQDTDILRSSSKSSVNADLETNGHQTSVASPGNFTFEENRKSTQLPLENHPERSP
ITDTAPSGSQGLEYPCQENLQHNVVINFNKKTAAPGKTTEEVVSLKLQDSKETISHTDQN
EGIEDHVNHAEHSTRTSEQSGVAPPSLRIPGEDGNGSGIDFKPTVNAQDADPADALAQIS
ESSQSMGRKGEITYSRNDSFMEKNVLNIDTMEGEEMGNYMSSTPYEDLDNHNVASEATLD
EEICLLRQERLILGEEQRKLERNAESVSSEMFAECQDLLQMFGLPYIIAPMEAEAQCAYM
EISNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIETELGLTRETLIRMALL
LGSDYTEGVSGIGIVNAIEVVRAFPEKDGLQKFRDWIESPDPSILGKFNSHTGSNSKKKS
STSGDKGGEMKDTANTSSFEENVSREYVDQTSVDDIKEIFMTKHRNVSKNWHLPSTFPSE
SVITAYISPQIDDSTEPFMWGKPDLSLLRKLCWEKFGWHNKKADELLVPVLKEYNKHETQ
LRLEAFYTFNERFAKIRSQRIKKAVKGITGKSSVDLMDDLVQPSSSGKKRGGPAALEDDK
SKNRSEVKDNSKGKASKKPRRQKNEGKSMQSENGGGDMLPPEGSQATNISGVASNLRGKR
GRGRGRARGRGREKEELNDDSTEVSSSDCDDRGEIEKHIQEPEAMSELRRSKRRRKHVEY
AEEEMHVGVDVDGSNDAAEKQEPVEQGNNIRTADGSDQKEGDNHSPDVGLSGDYLQSGGG
FCVDESETQGNTLDCQTGHPNMLTGNSHSGDCLLAGGGFCTDENEVQVDTTTHLDAGSAK
ADKEPCGLTNKEPTGGNSRAIKHGDSSCSEGAEDEGEINVGLRAMPSLRKKRRKV
NT seq 4488 nt   +upstreamnt  +downstreamnt
atgggggttcaaggtctatgggaactcctcgcccccgtcggccgccgcgtctccgtcgaa
accctcgccggaaaaaaactggccatagatgcgagcatatggatggttcagttcatgaag
gcgatgagagacgagagaggggagatgctgaggaacgctcacgtcctcggcttcttccgt
cgaatctgcaagcttctctttctccgaactaagcccgtcttcgtcttcgacggcggcacc
cccgccctcaagcgcagaaccatcgcatctcggaggcggcatcgtgagaatgcccaagcc
aagatcagaaagaccgccgagaagcttctcctcaatcatcttaaagctaaaaggcttgag
gaattagcccaagagatgaggaaaaccaaagatgagaagtctgatgcaaaggggaaacag
gtcgtcactgatgagaatcagggagataatcaagagcctgataagaaaagtatcaaggcg
ctcactcaagaagctttggatgagatgttggcggcatcacttgctgcggaagaagaggag
gtttttaatgccaaaaagactacatctgctggaaatgttcaacaagaaggggaggaagaa
gaagatgaagatgaggagatgatttttcctgtaacaagcggcaaggttgatccatctgtc
ttagcttctttgccaccatcaatgcagttggatcttcttgttcagatgcgggagaatcag
atggctgaaaacaggcagaagtatcaaaaaattaagaagacaccctcaaaattttctgag
ctacaaatacaatcatatcttagaaccgttgccttccgccgtgagatagatgaggtacaa
aaatcagctgctggaaggggactgggaggagtgcaaagctcaagaatagcttctgaagca
aatagggaattcatattttcttcatcatttactggtgataaacagatgctatcagctaaa
tcagttgaaaaaaatggagacatggtaaatcaatcaacaaagaagacaatcaatttagat
tcagtgaagcacagtttgttcgctagtcaatctcaaactaaatctcctgctgataaagtt
acaagtgattttggagatgatgttgagacatactgtgatgggagtggtcgtatgagagtt
agcagagttagaggattgggcattcatatgactcgagacctacaacggaatctggacttg
atgaaagagtctgagcaggattatagcaggggaggtatgagaacagatctgcaatctgag
tgcatcaaagaagcttctagtgcaaaaggcaactgtgaaactaacagctgctacaatgct
tctgtaagtattgaaggaaatagcgaaaccactattagagagactgggacattgacacaa
gaagataatcattgttctgatgacctatctgctcttggtagaaaacccctgatagagata
tctttctcagaagatgatgatggaatgaaagatgcagatgataatctgttcctgcagtta
gtttctggaaattcaccgtcacaattatgtgcaagtatccattcagatagtagtgaaaat
gagtctgaatctgaatgtatttgggaggaaggaacagttggtgagaaaaaagaaggcttg
caaaatgaccaaaacaaggaagacagatcgtctttggcagaagataaaagttgtgaaaaa
tgtgaaatggagtgggaggaaggagattgtgatgttcctaaagatgtttctaattgttat
gctggacaggaaaaagctgtttcacgtggatttcttgaggaagaagctgatatccaggaa
gcaataaggagaagtcttcaggatacagatatactgagaagttcatctaaatcatctgtt
aatgcagatttagagactaatggacatcaaacatcagttgcatcccctggcaatttcaca
tttgaagaaaataggaagagcactcagcttcccctagagaatcatcctgagaggagtcca
atcacagatactgcaccgagtgggagtcaaggcctggaatatccttgtcaagagaatttg
cagcataatgttgtaatcaatttcaataaaaaaactgctgcacctggaaaaacaactgaa
gaagttgtttctttaaaacttcaagacagcaaggaaacaatatcgcacactgatcaaaat
gaaggaatcgaagatcacgtgaatcatgcggaacattcaacaagaacttctgaacaatct
ggtgttgcaccacccagtttaagaatccctggggaggatggtaatggatctggtattgat
tttaaacccacagtcaatgcacaggatgctgatcctgccgatgcacttgcccaaatttca
gaatctagtcagtccatgggcagaaaaggtgaaattacctattccaggaatgattcgttt
atggagaaaaatgtcttgaacattgacactatggaaggagaggaaatgggaaattatatg
agtagcactccttatgaagatttggataatcacaatgttgcgtcagaagctactttggat
gaggaaatatgtcttcttagacaagaacgtctaattcttggagaagaacagagaaagctt
gagcgcaatgcagaatctgttagcagtgagatgtttgcagaatgtcaggatcttctccaa
atgtttggtttgccatatatcattgcaccaatggaagcagaagctcaatgtgcatatatg
gaaatatcaaacctagttgacggcgttgtaactgatgattctgatgttttcctattcgga
gctcgcaatgtctacaagaacatatttgatgatcgaaaatatgtggaaacatacttcatg
aaggacattgagactgagcttggtttgactagagaaacattaatacgcatggcactgctt
cttgggagtgattatactgaaggagtcagtggaattggaattgtaaatgccattgaagtt
gtacgtgcattccctgagaaagatggcctccaaaaattcagagactggatcgaatctcca
gatccttctattttaggaaaatttaattctcatactggtagcaattccaagaaaaagtca
tcaacgtcgggagataaaggaggtgaaatgaaagacactgcaaatacatcttcatttgaa
gagaatgtttcaagagagtatgtagatcaaacatctgttgatgacatcaaagagatcttt
atgactaaacacagaaatgtgagcaaaaactggcatttaccttcaacatttcctagtgag
tcggttattacggcatacatttccccacaaatcgatgattcgaccgagccctttatgtgg
gggaagccagatttatcactactaagaaagttatgttgggaaaaatttggatggcacaac
aagaaggcagatgagttgcttgtgcccgttctgaaggagtacaacaagcatgagactcag
ctgaggctagaagcattttatacatttaacgagcggtttgcaaaaatccgaagccagcga
attaagaaagctgtgaaaggaattactgggaaatcttctgtggacctgatggatgatctt
gtacagccctctagctctgggaagaagaggggtggtcctgctgctttggaagacgataaa
tctaaaaatcgttctgaggtaaaggataatagtaaaggaaaagcttcaaaaaaaccaaga
cgacagaagaatgagggcaaaagtatgcaatcagagaatgggggtggagatatgcttcct
ccagagggaagtcaggcaactaatataagtggtgtggcttcaaatttgagagggaagaga
gggagaggaagagggagagcaaggggaagggggagggaaaaagaagagctgaatgatgac
tctactgaagtaagttctagtgattgcgacgacagaggtgaaatcgagaagcatattcaa
gaaccagaagccatgtcagaattacgcaggtcaaaaagacgcagaaagcatgtggaatac
gctgaagaagaaatgcacgtgggagttgatgttgacgggtcaaatgatgcggctgagaag
caagaaccagttgaacaagggaacaacattaggactgcagatggatctgaccaaaaggaa
ggtgataaccatagccctgatgttggcttatctggagactaccttcagagtggtggtgga
ttctgcgttgatgagagtgaaacacaaggtaatacccttgattgtcaaactggtcatcca
aatatgttgactggcaatagccattccggagattgtctcctggctggaggtggcttttgc
acggatgaaaatgaggtgcaagtcgatacaacaactcatcttgatgctggctcagcaaag
gcagataaagagccttgcggcctaacaaacaaggaacctacaggaggaaattcacgagca
atcaagcatggggattcatcgtgttccgagggagctgaagacgagggcgagataaatgtt
ggcttgagagccatgccttccctgagaaagaagcgaaggaaagtgtga

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