Asparagus officinalis (garden asparagus): 109850776
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Entry
109850776 CDS
T05243
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109850776
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109850776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109850776
NCBI-ProteinID:
XP_020276436
LinkDB
All DBs
Position
7:6063161..6072646
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AA seq
1332 aa
AA seq
DB search
MKNMKLSTSVSVGIDLQSEDEYLLCSAFDVERDRVFFASSANVVYGLQLSSSQKGRSASK
AILSTYSEQIFLEPDDCIVAMDYLMEKEALVIGTSSGCLLLHIIELKTTEVVGRVEGGVK
SISASPDGALLAVTAGLGQLLVMTHDWEVLYETELNPQLSENGITDGMDESSYTQFQAPI
CWRGDGKYLATLGGPHESSSLQKIRIWERESGVLHSSSESKKFMGTSLDWMPSGAKLVAA
CDRKHENKPPLVVFFEKNGLERNSFGIDEPMGSIVKMIKWNCNSDLLAASVTCDVYDAIK
IWSFSNYHWYLKQEIRYSKLDGVEFSWDPTKPLHLMCWARGGKVTSYNFVWMTAVTDTST
ALVVDNSNVLVTPFSLFLMPPPMSLFRLKFCSPVQDIAFLCKNSKNQFAACLSDGNLCIV
ELPGMDIWEQFEGQEFTVETSSSDLTTGSFMHLTWLDTHVLLGVACYLDESHMTTVLRGH
ELAYQQSNCSHGYSLVEIKLVCSEDSVPDSVSFSGWQAKVSKALPLEGTVISIVRNPAKR
SSAFVQMDGGSILEYSSNSGFSEGSARSQLHELDSGSGFSLSCPWMKAVSVRDNSIVKPL
IFGLDDNGRLHAGSRIICNNCSSFSFYSKAGVVAEEVVTHLLLTTKQDLLFIVSIEDILH
GSLEENFERYNINQKRGEESKDYLNVWERGAKIVGVVHGDEAAVILQTTRGNLECIYPRK
LVLVSIINALLQRRFKDALLMVRRHRIDFNVIVDCCGLQAFIESSTDFVSQVNNLSHITE
FVCSFKNDDIMDTLYKNYISIGTLPRPRENPQNIGGQSKVSSVLLAVRKALVEHVPECPA
RELCILTTLARSEPPALEEALDRIKVIREMELSGADDSRRKLYPSSEESLRHLLWLTDSE
AVYEAALGLYDLNLAAIVALNSQKDPKEFLPYLRGLEKLQPVVMKYTIDVKLHRYQKALR
HIVAAGDDYHEDCMNLMKTNPELFPLALHLVTNNVKRFQVMEAWGDYLQAEKHYEDAAST
YLCCSSFQKALKAYRDCGDWKGVLTVAGLLKRGKEEVLQLANELCEEFQALGKPAEAAKI
ALEYCADVSRGVGYYILAREWDEALRVGYLHEREDLVSDVKDAALECASTMISEYKEGSE
KVAKYLARYLAVRQRRLVLAAKLQAEDNLVNDADYDTVSETSSNFSGMSAYTTRTTKESG
ASISSTTASKARYVRQQRKKGGKIRAGSPGEEMALVDHLKGMSLTASALRELKSLILVLL
MLGKEEIAQQLQNVADAFQLSQEAAVKLTEDTISSDTMDENTQTLEHYRRRLREAPQHSR
VLSWQSKVLLPP
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatgaagctttctacctctgtatcggtcggcatcgatctgcaatcggaggac
gagtaccttctgtgctccgctttcgacgtcgagcgtgatcgcgtgttcttcgcctcttca
gccaacgtcgtttatggacttcagctctcttcgtctcaaaaaggaaggtcagcgagcaaa
gctattttatctacatactctgagcaaatatttctggagcctgacgattgcatagtagct
atggactatttgatggagaaagaagccttagtaattgggacatcaagtgggtgcctctta
ctgcacatcatagaactaaaaacaactgaagttgttggcagggtggagggtggtgtgaag
agcatctcagcgagcccggatggagctcttcttgctgtgactgctggtctagggcagttg
ctagtcatgactcatgattgggaagtactgtatgaaactgaactcaacccacaactatct
gagaatggcatcacagatggcatggatgaatcttcctacactcaatttcaagcacccatt
tgctggagaggtgatggaaaatatcttgctactctaggaggacctcacgagtcttcttct
ttgcaaaagatcaggatctgggagcgtgaatcgggtgtcttgcattcttcttctgaatct
aaaaaatttatgggaacatccttagattggatgcccagtggagccaagttggtggcagcc
tgtgataggaaacatgaaaataagcctccccttgtagttttctttgaaaagaatggattg
gaaaggaactcttttggcattgatgagccaatgggaagtatagtgaaaatgataaaatgg
aactgtaactcggaccttcttgcagcttctgttacttgtgatgtatatgatgctattaaa
atctggtccttcagcaactatcattggtacttaaaacaagaaataagatattcaaagcta
gatggagtagagttcagctgggatccaacaaagccgttgcatttaatgtgctgggctcgt
ggtggcaaggtgacatcttacaactttgtttggatgactgctgtcacggacacgtccact
gctttggttgttgataactccaatgtactagttactcccttttccctgttcctcatgcca
ccgcccatgtctttgttcaggctgaaattttgtagtcctgttcaggacattgctttcctt
tgtaaaaactcaaagaatcagtttgctgcatgtctctctgatggtaatttatgcattgtt
gagcttcctgggatggatatatgggagcaatttgaaggccaagagtttactgttgaaacc
tcatcctctgatttgacaaccggatcttttatgcatctgacttggttagatacgcatgtt
ttgcttggtgttgcatgctacttggatgagagccatatgacaacagtattgagaggtcac
gagctcgcttatcaacagtcaaactgttcacatggttattctttggtagagatcaaactt
gtatgttctgaggattctgtgcctgattcagtgagtttttctggttggcaagcaaaggtt
tctaaggcattgcctttagaggggactgtcattagtattgtccggaatcctgccaaaaga
tcctcagcttttgttcaaatggacggaggatctattcttgagtattcttcaaattcaggt
ttttcagagggatctgcaaggtcacaactccatgagcttgattctggaagtgggttttca
ttgtcatgtccatggatgaaagcagtttctgttcgcgataatagcatcgtgaaaccctta
atctttggccttgatgacaatggcaggctgcatgctgggagtagaataatatgcaacaat
tgtagcagtttctcattttactctaaagctggggttgttgcagaggaagtagttacacac
ttgcttctcaccaccaaacaggatttactgtttattgtcagtatagaggatattttgcat
gggagcctagaagaaaattttgaacggtacaatatcaaccagaaacggggagaagaaagt
aaagactatttgaatgtatgggaaagaggggcaaagatagttggtgttgttcatggagat
gaagcagcagtcattttgcaaacaactcgtggtaacttggaatgtatatatcctagaaag
ctggtccttgtttccataattaatgctctgctccagcggcgtttcaaagatgcattgctc
atggtaaggcgacatagaatagattttaatgtaattgttgactgttgtggtctgcaagca
tttattgaatcatctactgactttgtgagtcaagtaaataaccttagtcatattactgaa
tttgtttgctcgtttaagaatgatgatattatggatactttgtacaagaattatatttct
atcggaaccttgcctagacctagagaaaatccccagaatattggtggacagagcaaggtt
tcttcggtgctgctggcagttcgtaaggcccttgtggaacatgtaccagaatgtcccgca
agagagctctgtatattgaccacgttagctcggagtgaacctcctgctttagaggaagca
ctggacagaataaaagtgattcgtgaaatggaattgtcaggggctgatgatagtcggaga
aagttatacccatcctctgaagaatctctgagacatctcttatggttgactgattcagaa
gctgtttatgaagcagctttaggcttgtacgatctgaaccttgctgccattgtagcattg
aattctcagaaggatccaaaggaatttcttccttatctgagaggattggaaaaattgcaa
cctgttgtcatgaagtacactattgatgtaaaattgcatagatatcagaaggcactaaga
catatcgtggcagcgggtgatgactatcacgaagattgcatgaaccttatgaagactaac
cctgaacttttcccacttgctcttcatttagtcaccaacaatgtcaagaggtttcaggtc
atggaagcatggggagattatcttcaagctgaaaaacattatgaagatgctgcttcaact
tatctgtgttgttcctcattccagaaagctttgaaggcatatcgtgattgtggtgattgg
aaaggcgtgcttactgtagctggtctcctgaaacgaggaaaagaagaagttcttcaacta
gcgaatgagctctgcgaagaatttcaggcgcttggaaagccagctgaggctgctaaaatt
gcgctggaatattgtgcagatgtttccaggggtgttgggtattatatactcgcacgagaa
tgggatgaagctctcagggttggctatttgcatgaaagggaggatctagtctctgatgtt
aaagatgcagctctggaatgtgccagcacaatgatatctgaatataaggagggatcagaa
aaagtagcgaaatatttggctcgctatctagctgttcgtcagagaagattagttcttgct
gctaaacttcaggctgaagacaatttggttaatgatgctgattatgatacagtttcagaa
accagtagtaactttagtggtatgagcgcatacaccacgaggacaactaaagaatcaggt
gcttcgatcagctctacaacagctagtaaggcacgttacgtgagacagcagaggaagaag
ggaggaaaaattcgtgctggaagccctggggaggagatggcactggtggatcatctgaag
ggcatgtctctaacggccagtgctctgcgagaacttaaatcgctaatcttagttcttcta
atgctcggaaaggaggaaatcgctcaacagttacaaaatgtagcggatgcatttcaattg
tcacaagaggcggccgtgaaattgacagaagatacaatatctagcgataccatggacgaa
aacacgcaaactttggagcattacaggagaagattaagagaggcgcctcagcattctcgt
gttctttcttggcaatctaaagtgctgcttccaccttga
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