KEGG   Asparagus officinalis (garden asparagus): 109850844
Entry
109850844         CDS       T05243                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03020  RNA polymerase
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109850844
  09124 Replication and repair
   03420 Nucleotide excision repair
    109850844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109850844
   03400 DNA repair and recombination proteins [BR:aof03400]
    109850844
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109850844
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109850844
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C
Other DBs
NCBI-GeneID: 109850844
NCBI-ProteinID: XP_020276501
LinkDB
Position
7:38517720..38527981
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEITHDVGERTQVLQ
DVAADPTLPRTKTVRCAVCNHPEAVFFQATARGEEGMALFFVCCNPSCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattctgccgtgaatgcaacaacatattgtacccgaaggaagacagg
gatcagaagatcctgctctatgcttgccgcaactgtgatcatcaggaggttgccgataac
aattgcgtctatagaaatgaaataactcatgatgtcggtgaacgcactcaggtcctacaa
gatgtagcagcagatcctactcttcctcgtacaaagacagtacgatgtgctgtatgcaat
catcctgaagctgtgttttttcaggctactgctaggggagaagaaggtatggcactattc
ttcgtgtgctgcaatccgagctgtggtcatcgatggagagattaa

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