Asparagus officinalis (garden asparagus): 109850911
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Entry
109850911 CDS
T05243
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109850911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109850911
03019 Messenger RNA biogenesis [BR:
aof03019
]
109850911
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109850911
RNA polymerase I system
109850911
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109850911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
109850911
NCBI-ProteinID:
XP_020276583
LinkDB
All DBs
Position
7:144220561..144224618
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AA seq
131 aa
AA seq
DB search
MGSSKRSDYMAEEEDRMASFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLDME
KEHDNVVNCTTPNFTGIISVMEPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQNICAD
NNVQYAPPKRT
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagcaagaggagcgattacatggcggaggaggaggacaggatggccagcttc
gctcagattccgacgagcttcggccatgagctcagagcttgtctccgctgtcgactcgtc
aagacctacgatcagttcagagagtcgggctgtgaaaattgcccgttcttggatatggaa
aaggagcatgataatgttgtcaactgcactactccgaactttacagggattatttctgtc
atggaaccaagtagaagttgggcggctcgatggttgaggataggacggtttatccctggt
tgttatacactcgcagtctctgaagagcttcctgaggaataccagaacatctgcgctgac
aacaacgtgcagtatgcccctccaaagcgtacgtga
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