Asparagus officinalis (garden asparagus): 109851193
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Entry
109851193 CDS
T05243
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109851193
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aof01007
]
109851193
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109851193
Enzymes [BR:
aof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
109851193
Amino acid related enzymes [BR:
aof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
109851193
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109851193
Prokaryotic type
109851193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
DUF2740
Motif
Other DBs
NCBI-GeneID:
109851193
NCBI-ProteinID:
XP_020276818
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Position
8:complement(20080587..20101790)
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AA seq
603 aa
AA seq
DB search
MPTVSVGRDRLFEALGKAYTQEEFDELCFEFGIELDDVTTEKAIIRKEKHLQSEENGDED
GEEIIYKIEVPANRYDLLCLEGIARALRIFIGKEKIPVYRCVDIPIESMLKMHVKPETNL
IRPFVVCAVLRGITFNEASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQAPFSYEAL
PPSEINFVPLKQVKKFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSNRTVLSLPPI
INGAHSAINLKTKNVFIECTATDLTKAKIVLNTMVTMFSEYCERKYEVEPVHVVYPDKRT
SEIKSSVDVHSRRDIYPDLSVTSFKAPVSEITYCNGVALALNRLTSLLNKMQLQTEQSTS
GENFLTVLVPPTRSDILHTCDLAEDVAIAFGYNNVPKSKPDAMTIGGRQPLSVFTDKIRL
EVCKAGYMEVVTWILGSHEENFAMLRRENDSKNAVIIENPRSADFGVTRTSLMTGLLKSL
KSNIDHPRPIKIFEVGDVVMVDKSNDVGASNNRCLAALYCNVTSGFEVILGLVDRIMKVA
PKVKIDDYKRPSDEPQYLPKRQCNIFLEEKKIGSFGIVHPEVLKNFGINDPCTFVEIDIQ
ALL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtcagcgtgggaagagatcgcctcttcgaagccctaggcaaagcctacacg
caggaggaattcgatgagctctgcttcgagttcggaatcgaacttgatgatgtgaccact
gaaaaggcgataattagaaaggagaagcatttgcagagcgaggagaatggtgatgaagat
ggagaggagattatttacaaaatcgaggttccagctaacagatatgacttgctctgtctt
gagggtattgcacgcgcccttcgtatctttatcgggaaggaaaagatacctgtctataga
tgcgttgatattccaatcgaatctatgctcaaaatgcatgttaaacccgagacgaatctg
attcggccgtttgttgtttgtgccgtattaagaggaataactttcaatgaagcaagttac
aacagcttcatcgaccttcaagacaagctgcatcaaaacatatgccgaaagagaactctg
gtggctattggcactcatgatttggacacacttcaggctcctttctcatatgaggccttg
cctccttcagagataaattttgtacctttgaagcaggttaaaaaattcagagctgatgag
ctaatggaattttacaaatctgacttgaaattgaagaaattcttgcatataattgaagat
tcccctgtctatccagttatttatgatagcaacagaaccgttctatcattgcctccaata
attaatggtgcacattctgcaatcaatctgaagacaaaaaatgttttcattgaatgcaca
gccactgacttgacaaaggcaaaaattgtattaaatacaatggtaacaatgttttcagag
tattgtgaaaggaaatatgaggttgagccagtccatgtggtatacccagacaaaaggaca
tctgaaatcaaatcatctgtagatgtacactcacggagagacatttatcctgacctttca
gttaccagttttaaggctcctgtttcagaaattacttactgcaacggagttgccctagct
ttgaaccgtttaacttcattgttgaacaagatgcaactgcaaactgaacagtccacttct
ggtgaaaattttctaactgtgcttgtgcctcctactagaagtgacatccttcatacttgt
gacttggcagaggatgttgccattgcttttggatataacaatgttccaaaatcaaagccg
gatgctatgacgataggaggacgtcagccgttgagcgtgtttactgataagatcagacta
gaggtatgtaaagcagggtacatggaggtggtaacgtggattttaggctcacatgaagag
aactttgcaatgttgaggcgggagaatgactcaaaaaatgcagtcatcattgaaaatcct
cgttcggctgattttggggttacacggacaagtctaatgacaggcctattgaaatctcta
aagagcaatatagaccatccaagacccataaagatatttgaagttggtgatgtcgtgatg
gtggataagtcaaatgacgtcggtgcatcaaataatcgctgccttgcagcactgtactgt
aacgttacatcaggattcgaggtaattcttggcttagtggatagaatcatgaaggttgct
cctaaggtcaaaattgatgattataagaggccttcagatgaaccacaatatcttccaaaa
agacaatgcaacatcttccttgaagagaaaaaaattggctcctttggcattgttcatcca
gaggtcttgaagaattttggcataaatgacccttgcactttcgttgagattgacatccag
gcattactatga
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