Asparagus officinalis (garden asparagus): 109851258
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Entry
109851258 CDS
T05243
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109851258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109851258
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109851258
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109851258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF7272
Motif
Other DBs
NCBI-GeneID:
109851258
NCBI-ProteinID:
XP_020276902
LinkDB
All DBs
Position
8:101340187..101395288
Genome browser
AA seq
1381 aa
AA seq
DB search
MSRRAEKLRCTKEPYIEDVGPRRIKSICFDAFSGDEVKKAAEVQVWSDRLYDLSAKPVEN
GLVDPRMGPPNKKVVCATCNGGFADCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCG
RILLEDAERREFLMKVRNPKADVHQKNMIMKKVRDKCKSTLQSPRSCASCGHKNGVLAKG
KSFQLSIIEKLEVVDKSLEAALSHLKEKPSYQHLHFLTPFDVFCLFKKMPDEDCELLNLC
VRPENLIVTEVAIPPAPIRPSVIVNSGQSNEDGLTAILKEVIQRNSRLREGIEGASVPMH
NCMDRWWSELQDVVVKYINSEAPSVIESKHRGLIQRLKGKQGRFRCNLSGKRVEFTGRTV
ISPDPNLKITEVAIPILMARVLTYPERVTQHNIEKLRQCVRNGPFKHPGANFVTLPDGTR
LHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFN
ESVCNPYNADFDGDEMNLHVPQTEEARTEAFTLMGVQNNLCTPKNGEILVASTQDFLTSS
FLITRKDTFYDRAAFSLMCSYIGDGMEVIDLPPPALIKPIELWTGKQLFSVIVRPNAQTR
VFVNFVVKERIHVKDTETMCPHDGYVYFRNSDLICGQLGKVTLGNGNKNGLFSVLLRDYN
SDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYGRCISFIELYE
NRKLKLRPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINI
SQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKTPAAKGFVANSFYTGLTATEFFFHTM
GGREGLVDTAVKTAETGYMSRRLMKSLEDLSLYYDQTVRSSNGGVVQFIYGDDGMDPAKM
EGENGTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSSAFKNL
LLDFLHKHVAELRKTRIRLQLQEDHKETSSVLENVAANISGISAQQLKVFMETCISRYHK
KKLEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPI
ITATLFCDDKEESARLVKSEIERTLLGEVAEAVKTVLKSNHPYISIVLDKERIKTLHMED
SLDSIKNSIVNHRNLKLKAEDITFHGKGNLRIFPRGRNAKGDNKDGSRLNSELHSLTSIL
PKVIVKGISTVDRAVINCQRGKYNLLVEGTNLLAVMGTPGVDASKTKSNHIMEIWQTLGI
EAARQSIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSVLMLAS
FEKTSEHLFNASFNHRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEQLPELKYGPGPVI
C
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcgagctgagaagctgagatgcacgaaagaaccctacatagaggacgtgggc
cctcgaagaataaaaagtatatgcttcgatgcgttttcgggagacgaagtaaagaaagca
gcagaggtgcaggtttggagtgataggctctatgatttaagtgctaagcctgttgagaat
ggtttggtcgatcccagaatgggacctcctaataaaaaagttgtatgtgctacatgcaat
gggggttttgctgattgccctggtcattttggatacttgaagctcacactcccagtcttt
aatgttggctattttaattccatcctaaacattttaaagtgtatctgcaagggctgcggc
agaatacttcttgaagatgcagaacgtagggaatttttgatgaaagtgagaaatcctaaa
gcagatgtgcatcagaagaatatgataatgaagaaagtcagagacaagtgcaaatcaact
cttcaatcgccccgttcttgtgctagctgtggtcataaaaatggtgttttagcaaagggg
aaatcttttcaactatctattattgaaaagcttgaagttgttgataaaagtctagaagcg
gcattatctcacttgaaggaaaaaccatcttatcaacacttacattttcttacacctttt
gatgttttttgtcttttcaaaaagatgcctgatgaggattgtgaactacttaacctttgt
gttcgacctgagaatctcattgtgacagaggttgcaatacccccagcacctattcgccca
tctgtcattgttaattcaggacaaagcaatgaggatggtctaactgccatattaaaagaa
gtcatacaacgcaattctcgtcttcgggagggcattgaaggtgcttctgttcccatgcat
aattgcatggaccgctggtggtcagaactacaagatgtagttgttaagtatataaacagt
gaagctccttcagtcatagagtctaaacatcgcggtcttatccaacgacttaaaggaaag
cagggacgttttcgttgcaatttatcagggaaacgggttgaatttactggaagaactgtt
atttctcctgatccaaatttaaaaattacagaggttgcaattccaattttaatggcccgg
gtattaacgtatccagaacgagttacacagcataacatagagaagctgcgacaatgtgtc
cgtaatgggcctttcaaacatcctggggcaaattttgtgacattacctgatggtactcgc
ttgcacttgaaatatgtggagaagaagaatgttgctaacgaactgaaatatggttgtgta
gtggaaaggcatttggaagatggagatattgttctatttaacaggcaaccaagtttgcat
cggatgtctatcatgtctcatagggcacggataatgccttggaggaccttgaggtttaat
gaatctgtttgcaatccttacaatgctgattttgatggagatgagatgaacttgcatgtt
cctcaaacagaagaggctcgtacagaagcatttacacttatgggggtccaaaataacttg
tgcaccccaaaaaatggtgagattttagttgcttccacacaagactttttgacatcgtcg
tttctcattacaaggaaggacaccttctatgaccgtgctgccttctcgctcatgtgctca
tacattggtgatggaatggaagttattgatttgcccccaccagctttgataaagccaatc
gaactttggacggggaaacagttatttagtgttattgtacggcctaatgctcaaacaaga
gtgtttgtaaattttgttgtcaaggagagaatacacgtgaaagatactgagacaatgtgc
cctcatgatggttatgtctatttccggaacagtgaccttatttgtggacaacttgggaag
gttactttgggaaatggcaacaaaaatggccttttctctgttcttttgagagactataat
tcagatgttgctgcaagttgtatgaatcgcttggcaaaattgagtgcccggtggattgga
aatcatgggttttctattggcattgatgatgttcaacccggagaacgccttaaccagcag
aaaaaaatgacaattgatgatggttatggaagatgcatttcgtttatagagttatatgag
aacagaaaacttaaactgaggcctggcgccaatgcagctgaaacgttagaagttgaaata
actgaagtgctgaatgaaattagaaaaacagctggagatgtttgtatgaaggaactccac
tggaggaacagtcctttaattatgtcacagtgtggatccaaggggtctgcaatcaacatc
agccaaatgattgcttgtgtaggccagcaatctgttggcggccgtcgtgccccaaatgga
tttatagatcgcacacttcctcactttccaattaagtcaaagacgcctgctgctaaaggg
tttgtagctaattcattttacactgggttgacggcaactgaattcttttttcatacaatg
ggaggacgggaaggccttgttgatactgcggtgaaaactgcagaaacaggatacatgtcc
cgtagactgatgaaatcattggaagatctctcactttattatgatcagacagtgcgcagt
tctaatggaggagtagttcagtttatttatggggatgatggcatggatccagcaaagatg
gaaggggaaaatggcactcccttaaatttggatcaactatacaagaaagtcatggcaaca
tgcccttgtagaccacaagactctttatcaccttcagagatcatttgccttataaatgaa
aggctatcaaagtatgatatgacccctgagggtggttgttcttctgctttcaagaatttg
ttattggattttctccataagcatgttgctgaattgaggaagacaagaatacggcttcaa
cttcaagaagatcataaggaaacttctagtgtattggaaaacgttgctgccaatatatct
ggaatttctgctcaacaactgaaggtattcatggagacatgcatatctcgttatcataaa
aagaagcttgaagcaggtgcagcaattggagccattggtgctcaaagtataggagaacca
gggacacagatgacactgaaaacatttcactttgctggagtcgcaagcatgaatgttact
cttggggttcctcgcattaaggaaattataaatgcagcaaaaaatattagcacaccaata
attactgctacacttttttgtgatgacaaagaggaatctgctcgtttagtgaagagtgaa
attgagagaactctccttggtgaggtggcggaagctgtgaagactgtactcaaatctaat
catccatatatctctattgtacttgataaggagcgaattaaaacattgcatatggaagat
tctcttgattccattaagaattcaattgtgaatcatcgaaatcttaaattaaaagcagag
gatattacattccatggcaaaggtaatttgagaattttccctcgtgggcgaaatgctaaa
ggagataacaaagatggaagtagattaaattctgaactgcactctttgacgtccatcctt
ccaaaggtcatcgtgaagggcatctcaacggtggatcgtgctgttattaattgtcaaaga
ggaaaatataatctactggttgaaggtacgaaccttttagcagttatgggcactcctggt
gttgatgcaagtaaaacaaagagtaatcatatcatggaaatttggcagacgctgggcatc
gaagctgcaagacaaagtatcataagcgaaatacaagatactatgaaaagtcatggaatg
agcattgatgctcgtcacatgatgctgctcgctgatgtgatgacttataaaggtgaagtg
ctcgggatcacgagatttggcatgacgaagatgaaagacagtgttttgatgttggcatca
tttgaaaaaacctcagagcacctgttcaatgcatcatttaatcacagggatgaccaaatt
gaaggagtatctgaatgtatcataatgggcataccaatgcagctgggaacaggaattctc
aaagttaggcaaagagttgaacagctgcctgaactgaaatatgggccaggtccagtaatt
tgttga
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integrated database retrieval system
