Asparagus officinalis (garden asparagus): 109851358
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Entry
109851358 CDS
T05243
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109851358
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109851358
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109851358
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
DUF7772
Motif
Other DBs
NCBI-GeneID:
109851358
NCBI-ProteinID:
XP_020277030
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Position
8:7911095..7921422
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AA seq
637 aa
AA seq
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MKIVTYNVNGLRQRVAQHGSLLKLLNSLDADIICLQETKLTRQDLSVDVTSAEGYEGFLS
CTRGSTRGRFAYSGVATFCRVKSAFGSDEVALPMAAEEGFTGTLHGLKKKEMMVGEFEVE
LPLNVEGLEDVTNEDLLKVDSEGRCVITDHGHFVLFNLYGPRAQEEDRERIQFKLLFFKV
LQKRWQSLLSQGRSIIVVGDLNIAPATMDRCDAEPGFEKDMFRKWLRSLLRDSGGPFFDV
FRSKHPARREAYTCFSPRVGAEEFNYGSRIDHILIAGPCLHKENDLEGHNLFNCHAEACD
IMVQFKRGKPENTPKWQGGRTIKLDGSDHIPVYAVLSNMPNLSVHNTPPLAVRYIPEVRG
WQQTIVSFLGKREKHCFKHPTVPNCQSDENTETQDSWKCALNADNEPTSNVEMAVGSSHF
SFHQRLSDSVLEAQRTGSSLSDNSDVLKENDDMVLSKLRKDQSLYRSSTVVMKKGRRSAY
SQLTLKSFFKQPKAANSFDTANAKAPQVQADWQEENENMFHKTESSCDKRLPENIEENSS
ELTVPITDACGQDLSFSSKMEKGNAVLEWQKIQEKMRTSIPLCKGHHEPCVARSVKKGSN
VGRRFYVCARAKGPESEPEANCNYFQWAPSRSKQKRN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacgtacaacgtcaacggtctccggcagcgcgtagctcagcacggctcc
ctcctcaagctcctcaactccctcgatgccgacatcatctgtctccaggagacgaagtta
acgaggcaggatctctccgtagacgtaacctctgccgagggatacgagggtttcctctcc
tgcactcgaggctcgacacgaggacgattcgcttattctggtgttgccacattttgccgg
gttaagtcggcatttggcagcgatgaggtggcgcttccaatggcggccgaagaagggttt
actgggactcttcatggcttgaagaagaaggagatgatggttggggagtttgaggtcgaa
ttgcctttgaatgtggaggggcttgaggatgtaaccaatgaggatttattgaaggtggat
agtgaagggcgttgtgttattacagatcatggtcatttcgtactttttaacctatacggc
cctcgagctcaagaagaggaccgggaaaggattcagtttaagcttttgttctttaaggtg
ttacagaaacggtggcaatcacttctaagccaagggaggagtattattgttgttggtgat
ctcaacattgcccctgctactatggaccgctgtgatgcggaaccaggtttcgagaaagat
atgtttagaaaatggctaagatctttgttaagagattctggaggtcctttttttgatgtt
ttccgttcgaaacacccagcaagacgagaagcgtatacttgcttctcaccaagagttgga
gctgaagagttcaattatggttcgcggattgatcatatcctcattgctggaccatgcctg
cataaagaaaatgatttggaaggccataacttgtttaattgccatgctgaagcatgtgat
attatggttcaatttaaaaggggaaagcctgagaatacacccaaatggcaaggtggaagg
actattaaactggacgggtcagatcatatacctgtttatgctgtcttaagtaatatgcct
aatctttctgtgcataacacccctcctttggctgtgaggtatattcctgaggtccgtgga
tggcagcaaactatcgtgtcattcctggggaaaagagaaaaacattgctttaagcaccct
actgtgccaaattgccaatcagatgaaaacactgaaacccaggatagttggaagtgtgcg
ctaaatgcggataatgagccaacatcaaatgtagagatggcagttggttcatcccacttt
tcttttcaccagagactttctgattcggtcttggaagcgcagcgtactggttctagttta
agtgataattcagatgttttgaaagagaatgatgatatggtgctttctaagcttcggaaa
gaccaatctctataccgttccagcacagtagtcatgaaaaagggaagacgtagtgcatat
tctcaactcacattaaagtcttttttcaagcaacccaaggctgcaaattctttcgatact
gcaaacgcaaaagcacctcaagtacaagcagattggcaagaagagaatgaaaatatgttt
cataaaacagagtcgtcatgtgataaacgccttccagaaaacattgaagaaaacagctct
gaattgactgtacccatcacggatgcatgtgggcaggacttaagtttttcttcaaagatg
gagaagggtaacgctgtactggagtggcagaagattcaagagaaaatgaggaccagtata
cctctctgcaagggtcatcatgaaccttgtgttgcaagatctgttaaaaaaggttcaaat
gttggtcgacggttttatgtctgtgctcgtgctaagggaccggaatctgaaccagaggca
aattgtaattactttcaatgggctccttcgagatccaaacaaaaaagaaactga
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