Asparagus officinalis (garden asparagus): 109851545
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Entry
109851545 CDS
T05243
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109851545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109851545
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109851545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_YTH1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
109851545
NCBI-ProteinID:
XP_020277325
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All DBs
Position
8
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AA seq
289 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDVREREVEDLFYKYGPIRNIDLKILPRPPSYAFVEFEEARDAED
AIRGRDGYNFDGSRLRVELAHGGRGHSSSFDRPRSYNGGGARGGVSRHSNYRVRVTGLPS
SASWQDLKDHMRRAGDVCFSEVFRDGGGTTGIVDYSNYDDMKYAIRKLDDSEFRNAFSRA
YIRVKEHDRKRSLSRSPSRSRSHSRSRSRDRSKSPKSKSARRSLSRSRSRSISSRSRSGS
RGRSLSGSRSRSRSPVTPPPSKRMSRSPRKPSPTRSNSASRSWFPPISW
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcgagcagaaccctctatgttggcaatctccctggggatgttcgagag
agggaggttgaagatttgttctacaagtatggacctattcgtaatattgatctaaagatc
cttccaaggcctccaagttatgcatttgtcgagtttgaggaggctcgtgatgctgaagat
gcgatccgcggtcgtgatggctataattttgatggtagcaggctacgggtggaacttgcg
catggtggaagaggccattcttcgtcttttgatcgtcctcgcagttacaatggaggaggc
gcccgtggtggtgtttcaaggcattcaaattatcgagtgagggtcactggtttgccttct
tctgcatcatggcaagacctgaaggaccatatgcgccgagctggtgacgtctgtttctct
gaagtattccgtgatggaggaggcactacgggaatagttgattattcgaactatgatgac
atgaaatatgcgatcagaaaacttgatgattctgagtttcggaatgcattttctcgagca
tatataagagttaaggagcatgaccgtaagagaagcttatctagaagccccagtcgtagt
cgttctcattcaaggagccgaagccgtgataggagcaaatctcccaaatccaagtcagcg
cgccgttcgttgtccagatctcgctcgagatccatttcttctcgctctcgttctggttcc
agaggacggtctttgtcaggatcgcggtcaaggtccagatctccagtaactcctcctccc
agcaaaagaatgagccggagcccaaggaagccgagtcctactcggagcaatagtgcatca
cggtcttggttccctcccatatcttggtaa
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