Asparagus officinalis (garden asparagus): 109851582
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Entry
109851582 CDS
T05243
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109851582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109851582
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109851582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109851582
NCBI-ProteinID:
XP_020277382
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Position
8
Genome browser
AA seq
928 aa
AA seq
DB search
MLGSEDRASKNVVDYSDPYVVSNLFQDGGKYGSVTKDYEALQTQRKQVFGYLSFQPPFSG
PCLGPQKLSQSYVVTESEPSPGSKEMKDVIDLEEPQESKDKTGADTMSVIVVDSDDEDGS
QQVQKQPSLHDFRAWLNSQMAERLRKNKSPLVASDSILPLSCVPGNAIEAKKLPSIQYEK
VVLHNAAEKHLASKLENRQYLTTRKREGASIENIEKSQRVKVARDGREDDALATQVSSPL
ISSEDHYYTPTIMTHHDDTETSESDGLEDIWKDMSMATEFSKDEMPTDESNLVQEEEDDC
AHSFMLEDDLGLVCRVCGVIQKRIDTIFDYQWMKGTRSTRTYMPGSRNSNLGDIAETSGK
DITEHLLLAADISIHPRHMKQMKPHQIEGFNFLVKNLLGDPPGGCILAHAPGSGKTFMLI
SFIQSFMAKDLHARPLVVLPKGILSTWRKEFQRWQVEDIPLYDFYSSKADSRSQQLEMLN
KWQENRSILLLGYKQFANIICEGGNNNVTAACQEKLLKIPTLLILDEGHTPRNDNTDMVD
SLAKVRTPCKVVLSGTLFQNHVGEVFNILKLVRPNFMKSEKSRAIVKRILSRVHISGGRK
PTKGNQESYFCELVEETLRSDENYKRKIAVIQELRDMTRDVLHYYKGDFLDELPGLIDFT
VLLNLGSKQKEIIRKLGKLDKFTKSSLEKAIYIHPQLMELRENDNGVKDNGISIEKVDAI
IESINIADGAKAKFFLNLLAMAERSGERMLVFSQYLLPLKFLERLVISLKGWRSGKEIFV
IFGDSSPEDRERSMDQFNNSPDAKIFFGSIKACGEGVSLVGASRVVILDVHLNPSVTRQA
IGRAFRPGQEKKVYIYRLVAAESHEEDDHNTSFRKELISKLWFEWSEHFGQFDFELAAID
IEDSQDVFFDYPVLRENIKALYRRSTDG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgctaggatccgaagatagggcttccaaaaatgtagtcgattattcggatccttatgtc
gtatccaatctttttcaagatggtgggaaatatggaagtgttacgaaagattatgaagct
ttgcagactcaaagaaagcaggtgtttggttatctgtcatttcaaccacctttttccggt
ccttgtttaggtccacaaaagctttctcagtcttatgttgttactgaatccgaaccatca
cccggatctaaagaaatgaaggatgttattgatttagaagaaccgcaagaatcaaaagat
aaaacgggagcagataccatgtcagtgatagttgttgattcagatgatgaggatggatct
cagcaagttcaaaagcaaccttctcttcatgattttcgagcatggttgaactctcagatg
gcggagcgactaagaaagaataaatcacctcttgtggcatctgattctattcttccactt
tcttgtgtgccaggaaatgccatagaagcaaaaaaactaccttctatccagtatgaaaaa
gttgttctgcataatgcagctgagaagcatcttgcttcaaaacttgagaatcgacaatat
cttacaacaagaaaaagggaaggtgcttctatagagaatatagagaagagtcaaagagta
aaagttgcaagagatggaagagaagatgatgctctagctactcaagtgagttcaccactc
atttcctctgaggaccattactacacaccaaccatcatgactcatcatgatgatacagaa
acatcagaaagtgacgggttagaagatatttggaaagatatgtctatggcaacagaattc
tcaaaggatgaaatgccaacagatgaatcaaatcttgttcaggaagaagaggacgattgt
gctcactccttcatgcttgaggatgatctcggacttgtttgtcgtgtttgtggagtcatt
cagaagagaattgacacaatcttcgattaccagtggatgaagggcactcgatcgacaagg
acttacatgcctggatcaagaaattccaatttgggtgacatagctgaaacctctgggaag
gacatcactgagcacttacttcttgctgcagatatttctatccatccaagacacatgaag
cagatgaagccccatcaaatagaaggttttaacttcttggttaaaaatttgctgggtgat
cccccagggggttgcatattggctcatgcgcctgggtctgggaaaacatttatgctcata
agctttatccagagctttatggccaaggatcttcatgcaaggccgttagttgttctgcca
aagggcattttgtctacctggagaaaagaattccagcgctggcaagtggaagacatccct
ctgtatgatttttactcctccaaggctgatagcagatcgcaacaattggaaatgttaaac
aagtggcaagaaaacaggagtattctacttctgggctacaagcagtttgccaatattatc
tgtgaaggtggcaataacaatgtaacagcagcgtgtcaggaaaagctcttaaagatccca
actcttctcattcttgatgaaggccatactccacgaaatgataacaccgacatggtggat
tcacttgcaaaagttagaactccatgcaaagtagtactttcaggaaccttattccagaat
catgtgggagaagtgttcaatattctgaagcttgtacgcccaaattttatgaagagtgag
aagtcacgagctattgtcaagcgtattttgagccgtgtacatatatcaggtggcaggaag
ccaaccaagggtaaccaggagtcatatttctgtgagttggttgaggagactttacggagt
gatgaaaactataagaggaaaattgcagtcatccaagagctcagggacatgacacgagat
gtgcttcactattacaaaggagatttcttggatgaactccctggattgatagacttcact
gtacttttgaatcttggctcgaagcagaaagaaattatcagaaagttaggtaagcttgat
aagttcacgaaaagctctttggagaaggccatttatattcatccacaactaatggaactt
cgagaaaatgataatggggttaaggataacggtattagcattgaaaaggtcgatgctatc
atagaatccataaatattgcagatggggcaaaagcaaaattctttctaaatctgttggcg
atggctgagcgatctggggagaggatgctcgtctttagtcaataccttcttccgttgaaa
tttttagaaaggttggtaatttcgctaaagggatggcgttctggaaaagaaatctttgtc
atctttggtgattctagtcctgaagatcgagaacgttcaatggaccaattcaacaactcc
cctgatgccaagattttctttggatccattaaagcttgtggggagggcgtttctcttgtt
ggtgcatctagagttgtcatcttagatgttcatcttaacccttcagttactcgtcaagca
attgggcgtgcatttcggccaggtcaagagaaaaaagtttacatatataggttggttgct
gctgaatctcacgaggaggatgatcacaatacctcctttaggaaggaattaatatcaaag
ctgtggtttgagtggagtgagcattttggtcaattcgactttgagttggctgccattgat
attgaagatagtcaagatgtgttctttgattaccctgtactaagggaaaatatcaaagct
ctttacagaaggtctactgatggctaa
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