KEGG   Asparagus officinalis (garden asparagus): 109851593
Entry
109851593         CDS       T05243                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109851593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109851593
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    109851593
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 POLH-Rev1_HhH PTCB-BRCT IMS_HHH DUF1805 CAA_C LIG3_BRCT
Other DBs
NCBI-GeneID: 109851593
NCBI-ProteinID: XP_020277401
LinkDB
Position
8:complement(62101265..62172120)
AA seq 1076 aa
MSYGSPSNSASSSSSTKKRGGPRNPSSSNSKKNHFKQSPFTDFGSYMTEKNRKLRQQFAA
AVVSSSSLASEDPGGGGMEKGIFRGVSIFIDGFTVPSSQELKDFMLKHGGRFENYFSRRR
VTHIICSNLPDSKMKNFRGVCFCFRAFSRGLPVVKPAWILECVVANKLLSWVPYQLSELV
NESGKQRKLSSFFTPIDISSSIDADNIKDPCTKVDDEDMDTSMKLLPLGEISLSNCNGED
DAGSLCFGHERVYEEINAEARFTDLEDEQTVVEASSASPCRPSDMTSGSCTDNTAEFLGA
SNHHHSTLGGPKFVENYFKNSRLHFIGTWRNRYRKRFLDKLKGVKHKNANVNSIFLGKRA
SVIHIDMDSFFVSVVIRNYPELVNKPVAVCHSDSPKGTAEISSANYPAREYGVKAGMFVR
DAKARCPNLVIVPYDFEAYEEVADQFYSILHKHCDKIQAVSCDEAFLDVTEATNNEPEDL
VQMIRKEIAETTRCTASAGIAENMLLARLATRSAKPNGQCFISSEKVDGYLKDLPVKALP
GIGHSLGEKMKSRQIHTCGQLRLISKETLHKEFGTKTGDMLWNYCRGVDNRAVEAVQETK
SVGAEVNWGVRFNDIADCEHFLLDLCKEISFRLQECGVEGHTVTLKVKKRKQGAEEPAKF
MGCGDCESMSRSMTLPFATDDVVLLERIAKQMFVSLHIDVKEVRGVGLQISRLETVDLNK
RGREKDVLESWLSSGKTKGETSSPLNPGDHRDALFSEKKPDCGIQQDDTSFQPCCVNQNP
SSGPSRLKLSSGGSHDSRTLTLPALCHLDIEVVKNLPPEIFSEMNDMYHGKLYDFMKKYI
DDDGKANAKSTKIPLEENTTYMSFTCQKIDSDADGNLAGGQAPCLEPYTDTKNKGKRPVC
SPELPVCNFPFQSERVQSSVANALDSFGKHPVNDGSQIVDTSKINLWLGNPPKWVEMFKD
SNCFLLNIVADMYAKSGRSCKLSSIFQSLFSQYPSDLDLTVGGWDEALSSLYDLITQYID
LNIESDIEELYICFRLLKRFTSTSKFLFEVYNIVLPSLQVSVNEQYGGHLQLSFNE
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgagctacggctccccttctaactccgcgtcctcatcgtcttccaccaaaaaaagaggc
ggaccccgaaaccctagctccagcaacagcaagaagaatcacttcaagcaatctcctttc
accgatttcggaagttacatgaccgaaaagaaccggaagctcaggcagcagttcgccgcc
gccgtcgtttcctcttcctctcttgccagtgaagatcccggcggcggaggaatggaaaag
ggaatctttcgcggtgtctcgatcttcattgacgggttcacagttccgtcgagtcaggag
ctcaaggatttcatgctgaagcatggtggccggttcgagaactacttctcgaggcgccgg
gtgactcatattatttgtagcaacttgcccgatagtaaaatgaagaactttaggggtgtg
tgcttttgtttcagggcgtttagccgagggctccccgttgtgaaaccagcatggattttg
gaatgtgtggtagctaataaactcttgagttgggttccttaccaactaagcgagcttgta
aatgagtctggcaagcaacggaaactttcttctttctttactcccatagacatctcaagt
tccattgacgctgataatattaaagatccctgcaccaaagttgatgatgaagacatggat
acaagtatgaaattattgcctctaggggagatcagcctttctaattgtaatggggaagat
gatgccggatctctatgttttgggcatgaaagagtttatgaagagataaacgcagaagcc
agatttactgacctggaagatgagcagactgttgtagaagcatcaagtgctagtccctgc
aggccttcagatatgactagtggtagctgcacggataacactgcagaatttctaggtgct
tccaatcatcatcactcaacactcgggggtccaaagtttgttgaaaactacttcaagaat
tcaagactgcatttcattgggacctggagaaatcggtatcgcaaacgatttcttgataag
ctgaaaggggttaagcacaaaaatgctaatgtgaattccatctttctggggaagagagct
tcagttattcacatagacatggacagtttttttgtgtctgttgtcataaggaactatcct
gagcttgtcaataagcctgtagcagtgtgccactcagacagtcccaaaggaactgcagaa
atatcttctgcaaactatcctgcacgagaatatggagtaaaagctggaatgtttgttaga
gatgccaaagctcgctgccctaacctcgttatcgtgccttacgactttgaagcatatgaa
gaggttgctgatcagttctatagcatattgcataaacattgtgacaaaatccaggcagta
agctgtgatgaagcatttctggatgtcactgaagccactaataatgaacctgaagactta
gtacaaatgataaggaaggagattgctgagaccacaaggtgcactgcaagtgcagggatt
gcagagaacatgctccttgcccgtttggctactagatcagcgaaaccaaatggtcaatgt
tttatctcatctgagaaagttgatggctatctgaaagatcttccggtcaaagcacttcca
ggcattggacactcactaggagaaaagatgaaaagcaggcaaattcatacgtgtggtcag
cttcgcttgatttcaaaggaaactcttcacaaggagttcggcacaaagaccggtgacatg
ctgtggaattactgtagaggggtagataatcgtgcagttgaagctgttcaggaaacaaaa
tctgttggtgctgaagtaaattggggcgtgagattcaatgacattgctgattgtgaacat
ttcctcctagacctctgtaaggagatatcatttcggttgcaagagtgtggagtggaagga
catactgttaccttaaaggtaaaaaaaagaaaacaaggagctgaggagcctgcaaagttt
atgggctgtggggattgtgaaagtatgagccggtcaatgacgcttcccttcgcgacagat
gatgtggttttgcttgaaaggatagcaaaacaaatgtttgtttctttgcatattgatgtc
aaggaagttcgtggtgttggcttacaaatatcaagacttgagactgtagacttaaataag
agaggtcgtgaaaaagatgtgctagaatcatggctttcttcaggaaagaccaaaggagaa
acaagctctccactcaacccgggtgaccatagagatgcattgttttctgagaaaaaacct
gattgtggaattcaacaagatgatacaagtttccagccatgttgtgtcaatcagaatcct
tcatctggcccatcacgtcttaagctatccagtggtggatcacatgatagcaggacattg
acattgccagcattgtgccaccttgacatagaggttgttaagaatctacctcctgaaata
ttttcggagatgaatgatatgtaccacggaaaattgtatgacttcatgaagaaatacatt
gatgatgatggaaaagcaaatgcaaagtccactaaaatcccattggaagagaatacgacg
tatatgtcatttacatgccagaaaatagattctgatgctgatggaaatttggctggtgga
caagctccttgtctagaaccttatacagacaccaaaaataaaggaaaaagacctgtttgt
tctcctgagctgcctgtatgcaattttccttttcagagtgagagggtgcaaagttctgtt
gcgaatgctcttgattcttttggtaaacatccagttaatgacgggtctcaaattgttgat
acatctaaaataaatctgtggttgggaaatcctccaaaatgggttgagatgttcaaagat
agcaattgcttcttgttgaatattgttgccgatatgtatgctaaatctggaagaagttgc
aaattgtcttccatttttcagtcactgttttctcaatatccatcagaccttgatttaact
gttggaggatgggatgaagctctctctagcttgtatgatcttataacgcagtacattgat
ctaaatattgaatctgacattgaggagctctacatttgctttcgccttttgaagagattt
acttcaacgtcaaagtttttgtttgaagtatacaacattgttcttccttcacttcaggtt
tctgtcaatgagcagtatggaggacatcttcagctttcattcaatgaatag

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