Asparagus officinalis (garden asparagus): CCL56_pgp038
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Entry
CCL56_pgp038 CDS
T05243
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCL56_pgp038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
CCL56_pgp038
03400 DNA repair and recombination proteins [BR:
aof03400
]
CCL56_pgp038
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCL56_pgp038
Transcription machinery [BR:
aof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCL56_pgp038
DNA repair and recombination proteins [BR:
aof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCL56_pgp038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
YP_009370053
LinkDB
All DBs
Position
CP:
Genome browser
AA seq
339 aa
AA seq
DB search
MVREGIAGSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKVPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGVRDASICVRGPRYVTAQD
IILPPSVEIVDITQHIANLTEPIDLRIELQIKRDRGYRMNPTNNSQDGSYPIDAVYMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
ENKNRFTLPFFTFQNGLTNLKKNKKGIPLKCIFIDQSELSPRTYNCLKRSNIHTLLDLLS
NSQEDLMKIEYFRTEDVKQILDTLQKHFAINLPKNKLSF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagggaatagcaggatccactcgaacactacagtggaaatgtgttgaatca
agaatagacagtaagcgtctttattatggtcgtttcattctgtccccgctcatgaaaggt
caagccgataccataggtattgccatgcgaagggctctacttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgaaaaggtaccgcatgaatattctacgatagtaggtatt
gaggaatcggtacatgaaattttaatgaatttgaaagaaattgtattgcgaagtaatctg
tatggagttagagacgcatccatttgcgtcaggggtcctagatacgtaaccgctcaagat
atcatcttaccaccttccgtggaaatagttgacataacacaacatatagctaacctgacg
gaaccaattgatttgcgtattgaattacaaatcaagagagatcgcggataccgtatgaac
cccacaaataactctcaagacggaagttatcctatagatgctgtatacatgcctgttcga
aatgcaaatcatagtattcattcttatgggaatggaaatgaaaaacaagaaatacttttt
ctagaaatatggacaaatggaagtttaactcctaaggaagcactttatgaagcttctcgt
aatttaattgatttatttattccttttctacatgcggaggaaggggacattcattttgag
gaaaataaaaacaggtttactctacccttttttacctttcaaaatggattaactaatcta
aagaaaaacaaaaaaggaattccattgaaatgtatttttattgaccaatcagaactatcc
cccaggacctataattgtctcaaaaggtccaatatacatacattattggaccttttgagt
aacagtcaagaagatcttatgaaaattgaatattttcgcacagaagatgtaaaacagata
ttggacactctacagaagcattttgcaatcaatttacctaagaataaactttcattttaa
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