Antiquaquibacter oligotrophicus: LH407_00045
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Entry
LH407_00045 CDS
T09620
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH407_00045 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_00045 (ruvB)
Enzymes [BR:
aog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH407_00045 (ruvB)
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH407_00045 (ruvB)
RecFOR pathway proteins
LH407_00045 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
Mg_chelatase
AAA_16
IstB_IS21
Zeta_toxin
nSTAND3
Sigma54_activ_2
AAA_25
Rad17
AAA_14
NTPase_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UDF13295
LinkDB
All DBs
Position
7155..8195
Genome browser
AA seq
346 aa
AA seq
DB search
MDVDAISSPDPESDQELAFEGALRPKSLDEFVGQTKVRGQLELLLKAAAMQNRAPDHILL
AGPPGLGKTTLAIIVALESGKPLRMSSGPAIQHAGDLAAVLSSLVPGEVLFIDEIHRMAR
SAEEMLYLAMEDFRIDIMVGKGAGATSIPLELAPFTLVGATTRAGLLPNPLRDRFGFTAH
LEFYDEPELERVLARAADLLGLELSGDSRAEIARRSRGTPRIANRLLRRVRDYELVHGGG
ASVAAVQAALELYDVDPLGLDRLDRAVMHAVLMRFDGGPVGLNTLAVSVGEEAETIESVV
EPFLVRIGLLTRTPRGRVASREAWKHFGLRPPAASGAQPGLFDDDL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacgcaatttcgagccccgatcccgaatcggaccaggaactcgccttcgag
ggggcgctacgaccgaaatctcttgacgaatttgtcggccagacgaaggtgcgcggtcag
ctcgagctgctccttaaggctgccgcgatgcaaaacagggcacccgatcacatcctgctg
gccgggccgcccggactcggaaaaacgacgctcgccatcatcgtcgcgctcgagagcggc
aaaccattgcgaatgtcgagcggtccggcgattcaacacgctggcgatctcgcggcagtc
ctctcgtctctcgtgcccggtgaagttctctttatcgacgagatccaccgcatggcgcgc
tcggccgaggagatgctctacctcgcgatggaggatttccggatcgacatcatggtggga
aagggcgcgggcgctacatcgattccgctcgaactcgcgccatttaccctcgtcggagcc
accacgagggctggcctcctccctaatcctctccgcgacaggttcggattcaccgcacac
ctggagttctacgatgaacccgaactcgaacgagtattagcccgagccgccgacctcctg
ggtcttgagttgtccggtgattcgcgagcagagattgcccgccgcagccgcgggacccca
cgaatcgcaaatcgtctcctccgacgggtgcgcgactatgaactcgtccacggcggggga
gcctcagttgccgccgtccaggccgcgctcgagctttacgatgtcgacccactcgggctt
gaccggttggaccgggccgtgatgcacgccgtgctcatgagattcgacgggggaccggtg
ggcctgaacaccctcgcggtctcggtaggagaagaagcggagacgatcgagtcggtcgtc
gagccgttcctcgttcgaatcgggctgctcacgcgcacacctcgaggccgagtggcgagc
cgtgaggcgtggaagcacttcgggctgcgaccacccgcggcatccggtgcccagccgggc
ctcttcgacgatgacctataa
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