Antiquaquibacter oligotrophicus: LH407_00230
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Entry
LH407_00230 CDS
T09620
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH407_00230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_00230
Enzymes [BR:
aog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH407_00230
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH407_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
4HBT_3
pPIWI_RE_REase
Motif
Other DBs
NCBI-ProteinID:
UDF13331
LinkDB
All DBs
Position
45012..46976
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AA seq
654 aa
AA seq
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MSESAIARVVVDSPLPQLDRLFDYSIPDALASEVVAGVRVKVPLRSAGRVADGLVVEVAE
RGGFDGPLSEIDSVVSPIPVLTPEVWRLARQAADRAAGSANDILRLAIPGRQVRVEKTFL
GATESEPIPVVASPTVQHYGETIDSVVTDRSRIALSAVPGVTELRDGRWVRTWAVTLAQA
AAACVARGDTAILVVPDYRDQNQVEAALAQYLPPELIIRADARQSNPDRYRGFLRGLGDT
ALAVVGNRSTVYFPAKRLGLIALWDDGDPLHAEPLAPYVHARDAALIRQEQRGCALIFAS
HSRSSEVQRLVELGWLIAVDPVRAAHPKVVPTAHQLSDDPMAQRARIPSLAWRTAREAVA
HGPVLVQVARPGYSPRLACADCGQTARCLRCSGPLAQRSAGSTPSCSWCGMLSTSWSCSH
CDGTRLRLVGAAGSTRTAEDLGRAFPGVRVIIADGEHPIEHVGSSPALVIATRGAEPIAD
GGYRAVLLLDGEQMIARESLRVAEDCLRWWSNAAALAAPGAVSVLSGVGGELATAMATWR
QADFAARELRDRRMLRFPPAVRVATVTGTLAAVAEAIADLPVEPSDVLGPVDLGSATVRS
IVRFDYSAGSEIASALRSELIRSASGRRSAARGGRPTTPALRVRLDDLEPFLES
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaatcagccatcgcccgcgtggtggtcgattcgccgctgccacaacttgatcga
ctcttcgactattcgatacccgatgcgctcgcatctgaggtggtcgccggtgtgagagtc
aaggtgccgctgaggtcggcgggacgcgttgccgacggcctcgtggtcgaggtcgctgaa
cgtggcggattcgatgggcctctcagcgaaatcgactccgtcgtgtccccgatccctgtc
ttgacgcccgaggtgtggcgcctggcgcggcaggcggccgatcgagcagcaggctcggcc
aacgacattcttcgcctggcgattcccggtcgccaggtaagggtcgaaaagacctttctc
ggggcaacagaatctgagccaatacccgtcgtggcaagcccgacggtccagcactacggc
gagacgattgattcggttgtgaccgaccggtccagaatcgcgctgtccgccgtgccggga
gttaccgaacttcgggacggtcggtgggtgaggacctgggctgtaactctcgcccaggcc
gcggcagcctgtgtggcgcgtggcgacaccgcgatactggtcgtgcctgactaccgcgat
cagaatcaggttgaggcggcgctggcgcagtatctgccgccggaactcatcatcagggcg
gatgcccggcaatccaacccagaccgttacaggggattcctccgcggcttgggtgacacc
gctctcgcggtcgtggggaatcgctcgacggtatatttccccgcgaaacgccttggactc
atcgcgctgtgggatgacggcgaccccctccacgccgaaccactcgctccgtatgttcac
gcgcgtgacgcggcgctgatccgccaggagcaacgggggtgcgcgctgatttttgcgtcc
cactcgcgtagttccgaagtgcaacgtttggtcgagctcggttggttgattgctgtcgat
cctgtccgggccgcgcacccgaaagttgtgcccaccgctcatcagctctccgacgatccc
atggctcagcgagcgcgcattccctcgctcgcgtggcgcaccgctcgggaagctgtcgct
cacggccccgtcctcgtgcaggtcgctcgacccggatactcgccgcgcctcgcgtgtgcc
gactgtggccagacagcacgctgtctgaggtgttctggcccgctcgctcaacgatccgcc
ggttcaacaccctcctgcagctggtgcggaatgctctcgacttcgtggtcgtgttcgcac
tgcgacggcacgcgacttcgtttggttggcgctgctggttcaacgagaacagcggaggac
ctggggcgagcgtttccgggggtcagggtgatcatcgccgacggcgagcatccgatagaa
catgtcggcagctctcccgccctcgtgatcgccactcgcggcgccgaacccatcgcagac
ggtggctatcgggccgtcttgctcctcgacggcgagcagatgatcgcgagggagtccctg
cgtgtcgcggaggattgcctgcggtggtggtcgaatgctgccgcgctggccgcccccggc
gccgtctcggtgctgagcggggtgggcggcgaactcgcgaccgcgatggcgacgtggcgc
caagccgatttcgccgcgcgtgaactgagggatcgacggatgctgcgcttcccgccagcc
gtgcgcgtggcgacggtcacgggaactctcgccgccgttgccgaagccatcgcggacttg
ccggtcgagccttcagacgtactgggtcccgtggatctcggctcagccaccgtgcggtcg
atcgtgcgtttcgactactccgccgggtcggagattgcctccgctcttcgctcggagctc
atccgtagtgcatccggccggcgcagcgccgctcgcgggggacgacccacaacccccgcg
ctgcgtgttcgtctcgacgatctcgaaccgttcctcgaatcgtga
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