Antiquaquibacter oligotrophicus: LH407_01390
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Entry
LH407_01390 CDS
T09620
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aog03009
]
LH407_01390
Enzymes [BR:
aog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LH407_01390
Ribosome biogenesis [BR:
aog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH407_01390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UDF13535
LinkDB
All DBs
Position
complement(279035..279820)
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AA seq
261 aa
AA seq
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MSSAEPTPEGERLQKVMAAAGVASRRASEDLIAQGRVTVNGEIVIEPGRRVLSTDRVTVD
GVAIQLDTSKRYVMLNKPVGVVSSLADEQGRPDLRRFTREYPERLFNVGRLDAATSGLLI
LTNDGELAHVLAHPSFGVMKTYIAKVAGGVSAQTVAKLTTGIDLDDGPIAADKARVLPGG
SGRESLVEITLHSGRNRIVRRMMDAVGHPVIDLVRRQFGPLHLGTLAVGATRDLTKVELG
QLLTLSRTGESGPETPEDDRG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctgagcccacgccggagggcgaacgactgcagaaagtgatggccgcagcg
ggggtcgcctcgcgccgggcatccgaagacctcatcgctcaggggcgggtgaccgtcaat
ggtgagatcgtcatcgagcctggtcgccgagtgctgtcgaccgaccgggtgaccgtcgat
ggtgttgcgatccagctcgacacgagcaaacgctacgtcatgctcaacaaacccgtcggg
gttgtgagttctctcgccgatgagcagggccgaccggacctgcggcgtttcacgcgcgag
tatcccgagcgacttttcaatgtcgggcgcttggatgcggcgacctcgggcttgctcatc
ctcaccaacgacggcgagctggcccacgtgctcgcccacccgtcgttcggagtgatgaaa
acctacatcgcgaaggtcgcgggcggggtgagcgcccagacggtcgccaagctcacgacc
ggcatcgacctcgacgacggccccatcgctgccgacaaggcgcgggtgcttcccggcggg
tccggtcgtgagtcgctcgtcgaaatcacgctccactccgggcgcaatcgcatcgtgcgt
cgcatgatggatgccgtcgggcatcccgtcatcgacctcgttcgccgacagttcggcccg
ctgcacctcggcaccctggccgtcggcgcgacgcgtgacctcactaaagtggaactcggc
cagctgctcaccctctcgcgaacgggggagagcgggcccgagacaccggaggacgaccgt
ggctga
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