Antiquaquibacter oligotrophicus: LH407_01755
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Entry
LH407_01755 CDS
T09620
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH407_01755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aog03019
]
LH407_01755
03016 Transfer RNA biogenesis [BR:
aog03016
]
LH407_01755
Enzymes [BR:
aog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LH407_01755
Messenger RNA biogenesis [BR:
aog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LH407_01755
Transfer RNA biogenesis [BR:
aog03016
]
Prokaryotic type
tRNA degradation factors
LH407_01755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
S1_RRP5
KH_NusA_1st
KH_2
Motif
Other DBs
NCBI-ProteinID:
UDF13602
LinkDB
All DBs
Position
complement(349496..351775)
Genome browser
AA seq
759 aa
AA seq
DB search
MEGPEIKFAEAVIDNGKFGKRVVRFETGRLAQQAQGAVAAYLDEDTMILSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPTFVEGLRNEVQ
IVITVLSIAPDEFYDALAINAASASTQISGLPFYGPVAGVRLALIGDQWVAFPKFSQLEE
AVFDLTVAGRLVTDANGNEDVAIMMVEAEATEVSWDLIKAGATKPDEAVVAQGLEASKPF
LKELIKAQESLAAQAAKPIQDFPLFPPYAQETYDAVAGFAYDELGGVYRIADKIERQTAD
DELKGRVKEHIAAKVAAEELPESALAEIGAAYKSVSKIVMRNRVLTEGIRIDGRGLADIR
ALDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYLHHYNFPPY
STGETGRVGSPKRREIGHGFLAERALVPVLPPREEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLISDEVDGQTRYAALTDILGAEDALGDMDFKVAGTSEF
VTAIQLDTKLAGLPSSVLDGALKQAKEARTAILSVINAAIDAPDEMAPTAPRVISVQIPV
DKIGELIGPKGKTINQIQDDTGADISIEDDGTVYIGAVDGPSAEAARAAVNAIANPLNPE
VGERFLGTVVKLATFGAFVSLTPGKDGLLHISEVRKLAGGKRVENVEDVLSVGQKIQVEI
TKIDDRGKLSLAPVQEEAEAADTDSSAAASEGPEAPAEG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttggagggtcccgaaatcaagttcgccgaagccgtcatcgataacggcaagttcggcaag
cgtgtcgtccggtttgagaccggccgcctcgcacagcaggcacagggcgccgtcgcggcg
tacctcgacgaggacacgatgattctctccgcgacgagtgccggaaagcacccgcgcgag
ggattcgacttcttcccgctcacggtcgacgtggaagagcgttcctacgctgcaggcaag
atccccggaagcttcttccgtcgcgagggtcgcccctcgaccgaggccatcctcgtgtgc
cgtctcatcgaccgcccgctgcgtccgaccttcgtcgaaggtctgcgcaacgaggtccag
atcgtcatcacggtgctctcgatcgcacccgacgagttctacgacgcgctcgccatcaac
gcggcatccgcgtccacgcagatctccggactcccgttctacggccccgtcgccggtgtt
cgcctcgcgctcattggtgaccagtgggttgccttccccaagttctcgcagctcgaagag
gcagtcttcgacctcaccgtcgccggtcgcctggttaccgacgcgaacggcaacgaggac
gtcgcgatcatgatggtcgaggcagaggccaccgaggtgagctgggacctgatcaaggcc
ggtgcgaccaagcccgacgaggccgttgtcgcccagggcctcgaggcatccaagcccttc
ctcaaggagctcatcaaggcccaggagtcgctcgcagcacaggctgccaagccgatccag
gacttcccgctgttcccgccgtacgcgcaggagacctacgacgccgtcgccggtttcgcc
tacgacgagctggggggtgtttatcggatcgcggacaagatcgagcgtcagaccgctgac
gacgagctcaagggccgcgtcaaggagcacatcgccgcgaaggtcgccgcagaggagctc
cccgagtccgcgctcgccgagatcggcgcagcgtacaagtcggtctcgaagatcgtcatg
cgtaaccgcgtcctcaccgagggcatccgtatcgatggccgtgggctcgccgacatccgt
gcgctggatgccgaggtccaggtcattccgcgtgtgcacggttccgcgatcttccagcgt
ggtgagacccagatcctgggtgtcacgacgctcaacatgctcaagatggagcagcagatc
gactcgctctcgccggtgacgaagaagcgctacctgcaccactacaacttcccgccgtac
tcgaccggcgagaccggacgcgtcggcagccccaagcgccgcgagatcggccacggcttc
ctcgctgagcgcgccctcgttcccgttctgccgcctcgcgaggagttcccctacgcgatt
cgccaggtctctgaggcgctcggctccaacggatcgacgtcaatgggctcggtgtgtgca
tcgactctgtcgctgctgaacgccggtgtgccgcttcgcgcacccgtcgccggtattgcg
atgggtctcatctccgacgaggttgacggtcagacccgctacgcggcgctcaccgacatc
ctcggtgccgaggacgcgctgggcgacatggacttcaaggttgccggtacctccgagttc
gtcaccgccatccagctcgacacgaagctcgcgggactgccctcgagtgttctcgacggc
gcgctcaagcaagccaaggaggctcgcaccgcgatcctgtcggttatcaacgccgcgatc
gacgcgcccgacgagatggcgccgaccgcgccgcgtgtaatcagcgtgcagatccccgtc
gacaagatcggtgagctcatcggcccgaagggcaagacgatcaaccagatccaggacgac
accggcgccgacatctcgatcgaggacgacggcaccgtgtacatcggtgccgtggacggt
ccgtcggccgaggcggctcgcgccgcggtcaacgcgatcgcgaacccgctgaaccccgag
gtcggcgagcggttcctcggaaccgtcgtcaagctcgcgacattcggtgcgttcgtctcg
ctcacccccggcaaggacggcctcctgcacatcagcgaggtccgcaagctcgccggcggt
aagcgcgtcgagaacgtcgaggacgtcctctcggtcggccagaagatccaggtcgagatc
accaagatcgacgaccgtggaaagctctcgctcgccccggttcaggaagaggctgaggct
gcggacaccgatagctcggctgccgcatccgagggccccgaggctcccgcggagggctga
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