Antiquaquibacter oligotrophicus: LH407_01900
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Entry
LH407_01900 CDS
T09620
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LH407_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_01900
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LH407_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5321
Motif
Other DBs
NCBI-ProteinID:
UDF13630
LinkDB
All DBs
Position
complement(378636..379532)
Genome browser
AA seq
298 aa
AA seq
DB search
MRSIWKGAITFGLVNVPVKVYSATEDHDVSLHQVHDKDGGRIRYKRVCELDGEVVEYANI
AKAYDDGDRTVILTDADMATLPAERSKEIDVVEFVPTDQVDPIMFEKSYYLEPDSSSVKA
YALLRRTLEETDRTAIVKYALRQKTRLGALRVRGDVLMLQSLLWDDEVREAQFPALDQKV
SISDKELQMSQALVASFESDFSPEKFTDDYQEQLRELIEAKLEKGDAVDTAETFGDAGEE
GGGEVLDLMEALRRSVERNRSGSTKDDTSGAKKTTAKKAPAKKATKKSAASKSTSKAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagatccatttggaagggcgcgatcacgtttggcttggtgaacgtgcccgtcaaggtc
tactcggccaccgaggatcacgacgtgtcgttgcaccaggtgcatgacaaggatggcgga
cgcatccgatacaagcgtgtgtgcgaactggatggcgaggtcgtcgaatacgccaatatc
gccaaggcctacgacgacggggatcgcacggtcatcctcacggatgccgacatggcgacg
ctgccggccgagcgcagcaaagagattgacgtcgtcgagtttgtgccgaccgaccaagtc
gacccgatcatgttcgagaagagctattacctcgagcccgactcgtcgtcggtgaaggcg
tacgctctcctgcgtcgcacgctcgaggagaccgatcgcacggccatcgtcaagtacgcc
ctacgtcagaagacacggctcggcgcactgcgcgtccgcggggacgtgctcatgctgcaa
tcgctgttgtgggacgacgaggtgcgggaggcacagttccccgccctcgatcagaaggtg
tcgatcagcgataaggaactgcagatgtcgcaggctctcgtggcatccttcgaatccgat
ttctctcccgaaaagttcaccgacgactatcaggagcaactgcgggaactgatcgaagcg
aagctcgagaagggtgacgccgtcgacacggcggagaccttcggcgatgccggcgaggaa
ggcggcggggaggtgctcgatctcatggaggctctccgacgaagcgtcgaacgtaaccgc
tcgggttcgacgaaggacgacacgtcaggggccaaaaagaccacggcgaaaaaggctccc
gcgaaaaaagcaacaaaaaagtcggccgcgagcaagtcgacgagcaaggcgtcctag
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